chr17 : 74,107,980 74,108,829
849 bp 70 TFs 2 linked genes
This 849 bp open chromatin element is linked to LINC02074 and RPL38 and is bound by 70 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
LINC02074 4.1 kb Proximal Proximity
RPL38 95.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:74,102,980 – 74,113,829
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 333 bp overlap
BRD4 8 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 137 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 630 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 584 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 397 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 480 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 421 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 488 bp overlap
CEBPA 2 datasets
ChIP T-47D GSE132649.CEBPA.T-47D 78 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 52 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 114 bp overlap
Cebpa 8 datasets
ChIP BLaER1 ENCFF031ISE 139 bp overlap
ChIP BLaER1 ENCFF093OYK 193 bp overlap
ChIP BLaER1 ENCFF274GAT 196 bp overlap
ChIP BLaER1 ENCFF335XTP 66 bp overlap
ChIP BLaER1 ENCFF364PUR 150 bp overlap
ChIP BLaER1 ENCFF680YXW 172 bp overlap
ChIP BLaER1 ENCFF798NMV 89 bp overlap
ChIP BLaER1 ENCFF844FIP 156 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 226 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 554 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 239 bp overlap
EZH2 9 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 661 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 332 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 183 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 628 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 441 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 99 bp overlap
ChIP T98G GSE112240.EZH2.T98G 372 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 420 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 298 bp overlap
FEZF2 1 dataset
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 505 bp overlap
ChIP DE DE-FOXA2-2 660 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 64 bp overlap
FOXN3 1 dataset
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 146 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 586 bp overlap
ChIP DE DE-GATA4-2 655 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 438 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 505 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 529 bp overlap
ChIP DE DE-GATA6-2 849 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 629 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 660 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 743 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 636 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 720 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 675 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 579 bp overlap
ChIP foregut GSE117136.GATA6.foregut 456 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 477 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 281 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 242 bp overlap
GCM1 1 dataset
Motif DE_48h DE_48h-GCM1_MA0646.2 10 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 431 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 152 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 155 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 590 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 519 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 716 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 723 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 741 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 235 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 128 bp overlap
MYCN 4 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 472 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 622 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 166 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 540 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 417 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 290 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 246 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 204 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 247 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 475 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 436 bp overlap
RAD21 2 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 117 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 294 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 137 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 140 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 89 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 696 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 826 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 738 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 622 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 783 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 718 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 622 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 628 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 438 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 256 bp overlap
SNAI1 1 dataset
Motif DE_48h DE_48h-SNAI1_MA1558.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 310 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 825 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 242 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 449 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 404 bp overlap
TCF12 1 dataset
Motif DE_48h DE_48h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_48h DE_48h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 441 bp overlap
TP53 1 dataset
ChIP GM06170 GSE55727.TP53.GM06170 63 bp overlap
TRIM28 2 datasets
ChIP WA01 GSE78099.TRIM28.WA01 96 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 283 bp overlap
Wt1 1 dataset
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
YY1 4 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 171 bp overlap
ChIP K-562 ENCSR000EWF.YY1.K-562 111 bp overlap
ChIP K562 ENCFF660QRE 311 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 260 bp overlap
Yy1 1 dataset
Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap
ZEB1 2 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 113 bp overlap
ZFP42 1 dataset
Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 261 bp overlap
ZNF148 1 dataset
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF460 1 dataset
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
ZNF93 1 dataset
Motif DE_48h DE_48h-ZNF93_MA1721.2 14 bp overlap
ZSCAN16 1 dataset
Motif DE_48h DE_48h-ZSCAN16_MA2100.1 18 bp overlap