chr17 : 36,945,816 36,946,730
914 bp 60 TFs 3 linked genes
This 914 bp open chromatin element is linked to AATF, LHX1, and LHX1-DT and is bound by 60 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
AATF 2.2 kb Proximal Proximity
LHX1 9.0 kb Proximal Proximity
LHX1-DT 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:36,940,816 – 36,951,730
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 233 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 213 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 205 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 321 bp overlap
ASH2L 6 datasets
ChIP H1 ENCFF399KAM 692 bp overlap
ChIP H1 ENCFF399KAM 737 bp overlap
ChIP H1 ENCFF399KAM 533 bp overlap
ChIP H1 ENCFF399KAM 327 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 542 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 169 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 503 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 166 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 205 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 263 bp overlap
BRD4 2 datasets
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 208 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 667 bp overlap
CBX2 2 datasets
ChIP K-562 ENCSR000ATU.CBX2.K-562 328 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 322 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 595 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 332 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 108 bp overlap
CTCF 7 datasets
ChIP BC-3 GSE135740.CTCF.BC-3 295 bp overlap
ChIP GM12864 ENCFF357DQE 285 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 125 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 283 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 266 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 173 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 131 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 238 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 491 bp overlap
E2F6 4 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP H1 ENCFF785DWK 272 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 199 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 139 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 285 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 451 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 167 bp overlap
EZH2 36 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 98 bp overlap
ChIP A673 ENCFF790MVL 612 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 914 bp overlap
ChIP GM23338 ENCFF613YON 238 bp overlap
ChIP H1 ENCFF232NZA 914 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 748 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 286 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 280 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 914 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 295 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 412 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 560 bp overlap
ChIP SK-N-MC ENCFF674XUJ 651 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 794 bp overlap
ChIP astrocyte ENCFF365JTP 654 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 649 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 117 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 639 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 693 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 627 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 422 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 914 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 465 bp overlap
ChIP fibroblast of lung ENCFF479BAW 156 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP hepatocyte ENCFF552DZB 443 bp overlap
ChIP keratinocyte ENCFF070STK 186 bp overlap
ChIP keratinocyte ENCFF070STK 583 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 320 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 121 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 733 bp overlap
ChIP neural progenitor cell ENCFF018MKA 914 bp overlap
ChIP neural progenitor cell ENCFF472NFV 914 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 421 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 412 bp overlap
ChIP DE DE-GATA4-2 599 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 467 bp overlap
ChIP DE DE-GATA6-2 525 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 482 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 597 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 588 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 604 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 363 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 396 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 366 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 596 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 342 bp overlap
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 207 bp overlap
HNRNPLL 4 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 272 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 239 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 282 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 203 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 143 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 166 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 108 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 361 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 289 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 481 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 598 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 91 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 301 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 202 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 350 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 364 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 507 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 893 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 335 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 522 bp overlap
PRDM15 2 datasets
ChIP WTC11 ENCFF108TMF 401 bp overlap
ChIP WTC11 ENCFF108TMF 401 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 245 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 381 bp overlap
ChIP H1 ENCFF239FFS 725 bp overlap
ChIP H1 ENCFF239FFS 539 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 207 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 869 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 139 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 407 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 688 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 811 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 914 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 483 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 660 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 557 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 702 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 653 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 274 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 564 bp overlap
SUZ12 9 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 903 bp overlap
ChIP H1 ENCFF881NFR 914 bp overlap
ChIP K562 ENCFF397TBJ 445 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 914 bp overlap
ChIP NT2/D1 ENCFF574SXS 721 bp overlap
ChIP NT2/D1 ENCFF574SXS 731 bp overlap
ChIP NT2/D1 ENCFF574SXS 510 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 453 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 177 bp overlap
TET2 1 dataset
ChIP Jurkat_RUNX1KD GSE85524.TET2.Jurkat_RUNX1KD 216 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 117 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 176 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 434 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 368 bp overlap
ZNF316 3 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 456 bp overlap
ChIP K562 ENCFF281INV 426 bp overlap
ChIP K562 ENCFF838QCD 417 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 771 bp overlap