chr17:2,691,692–2,692,319

chr17 : 2,691,692 – 2,692,319

627 bp 66 TFs 6 linked genes

This 627 bp open chromatin element is linked to 6 target genes and is bound by 66 transcription factors.

Linked Genes

6 genes

Gene	Expression	Dist. to TSS	Distance	Link type
CLUH		19.8 kb	Distal	Multiome
CCDC92B		57.7 kb	Distal	Multiome
RAP1GAP2		63.7 kb	Distal	Multiome
PAFAH1B1		98.3 kb	Distal	Multiome
METTL16		180.1 kb	Distal	Multiome
MNT		290.9 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

AGO1 2 datasets

ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 169 bp overlap

ChIP Hep-G2 GSE120104.AGO1.Hep-G2 169 bp overlap

AGO2 3 datasets

ChIP HepG2 ENCFF252VFI 260 bp overlap

ChIP HepG2 ENCFF252VFI 141 bp overlap

ChIP HepG2 ENCFF773YDL 138 bp overlap

ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 212 bp overlap

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 196 bp overlap

ARID2 3 datasets

ChIP Aska-SS GSE108025.ARID2.Aska-SS 606 bp overlap

ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 256 bp overlap

ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 297 bp overlap

BRD4 10 datasets

ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 181 bp overlap

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 219 bp overlap

ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 195 bp overlap

ChIP COLO-741 GSE73319.BRD4.COLO-741 140 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 511 bp overlap

ChIP T-47D ERP003925.BRD4.T-47D 449 bp overlap

ChIP T-47D ERP003925.BRD4.T-47D 66 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 198 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 155 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 261 bp overlap

ChIP hMSC GSE117084.CBX4.hMSC 161 bp overlap

ChIP HCT-116 GSE72622.CDK9.HCT-116 50 bp overlap

DNMT3B 1 dataset

ChIP HUES-8 GSE99346.DNMT3B.HUES-8 89 bp overlap

EGR1 2 datasets

ChIP K-562 ENCSR000BNE.EGR1.K-562 297 bp overlap

ChIP K562 ENCFF006PJY 245 bp overlap

EP300 1 dataset

ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 421 bp overlap

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 130 bp overlap

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 102 bp overlap

ChIP K-562_DOX GSE23730.ERG.K-562_DOX 124 bp overlap

ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 176 bp overlap

ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap

FOXA2 1 dataset

ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 158 bp overlap

GLIS2 3 datasets

ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 179 bp overlap

ChIP HEK293 ENCFF446EIF 115 bp overlap

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 127 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 138 bp overlap

HEXIM1 2 datasets

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 220 bp overlap

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 325 bp overlap

ChIP K-562 ENCSR000EGT.IRF1.K-562 143 bp overlap

ChIP A549 ENCFF846DUV 451 bp overlap

ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 521 bp overlap

KDM5B 2 datasets

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 114 bp overlap

ChIP WA01 ENCSR000AUR.KDM5B.WA01 97 bp overlap

KLF10 2 datasets

ChIP HEK293 ENCFF326EGX 183 bp overlap

ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 276 bp overlap

KLF12 1 dataset

ChIP HEK293 GSE76494.KLF12.HEK293 208 bp overlap

ChIP keratinocyte GSE140991.KLF3.keratinocyte 325 bp overlap

ChIP ESO-26 GSE132680.KLF5.ESO-26 220 bp overlap

ChIP HEK293 ENCFF929IAJ 316 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 132 bp overlap

MBD2 2 datasets

ChIP HMEC-1 GSE63233.MBD2.HMEC-1 145 bp overlap

ChIP HeLa GSE41006.MBD2.HeLa 180 bp overlap

ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 57 bp overlap

ChIP Jurkat GSE59657.MYB.Jurkat 222 bp overlap

ChIP P493-6_0HR GSE125863.MYC.P493-6_0HR 70 bp overlap

NCAPH2 3 datasets

ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 144 bp overlap

ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 180 bp overlap

ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 275 bp overlap

NFKB1 1 dataset

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 140 bp overlap

NR2F2 2 datasets

ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 379 bp overlap

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 491 bp overlap

ChIP HEK293 GSE89017.OGG1.HEK293 69 bp overlap

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 214 bp overlap

PCBP1 2 datasets

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 174 bp overlap

ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 171 bp overlap

POLR2A 1 dataset

ChIP GM23338 ENCFF450WCS 180 bp overlap

POLR2G 2 datasets

ChIP K562 ENCFF047BLG 180 bp overlap

ChIP K562 ENCFF648YPL 180 bp overlap

POU5F1 5 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 121 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 247 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 109 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 143 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 188 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 627 bp overlap

RBFOX2 3 datasets

ChIP HepG2 ENCFF554DMZ 75 bp overlap

ChIP HepG2 ENCFF939HTZ 77 bp overlap

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 181 bp overlap

RBM22 3 datasets

ChIP HepG2 ENCFF561IAJ 137 bp overlap

ChIP K-562 GSE120104.RBM22.K-562 93 bp overlap

ChIP K-562 ENCSR848AOP.RBM22.K-562 64 bp overlap

RBM39 2 datasets

ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 236 bp overlap

ChIP Hep-G2 GSE120104.RBM39.Hep-G2 235 bp overlap

ChIP PANC-1 ENCSR000BJO.REST.PANC-1 100 bp overlap

ChIP DKO GSE131606.SMC1.DKO 194 bp overlap

SSRP1 1 dataset

ChIP hiF-T GSE98758.SSRP1.hiF-T 117 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 172 bp overlap

SUPT16H 1 dataset

ChIP hiF-T GSE98758.SUPT16H.hiF-T 126 bp overlap

SUPT5H 3 datasets

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 282 bp overlap

ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 124 bp overlap

ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 366 bp overlap

TAF15 2 datasets

ChIP Hep-G2 GSE120104.TAF15.Hep-G2 111 bp overlap

ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 171 bp overlap

TP63 3 datasets

ChIP breast-organoid GSE113909.TP63.breast-organoid 54 bp overlap

ChIP keratinocyte GSE33571.TP63.keratinocyte 51 bp overlap

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap

TRIM24 1 dataset

ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 477 bp overlap

TRIM25 2 datasets

ChIP BT-549 GSE79588.TRIM25.BT-549 225 bp overlap

ChIP BT-549 GSE79588.TRIM25.BT-549 352 bp overlap

VEZF1 2 datasets

ChIP K562 ENCFF053XDV 627 bp overlap

ChIP K562 ENCFF053XDV 449 bp overlap

WDR5 2 datasets

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 222 bp overlap

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 161 bp overlap

ChIP Huh-7 GSE97411.YY1.Huh-7 173 bp overlap

ChIP K-562 ENCSR000BKU.YY1.K-562 119 bp overlap

ZBTB33 2 datasets

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 174 bp overlap

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 205 bp overlap

ZBTB48 1 dataset

ChIP U2OS GSE96776.ZBTB48.U2OS 56 bp overlap

ZBTB6 1 dataset

ChIP HEK293 GSE76494.ZBTB6.HEK293 185 bp overlap

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 627 bp overlap

ZMYND11 3 datasets

ChIP HeLa GSE51672.ZMYND11.HeLa 159 bp overlap

ChIP HeLa GSE51672.ZMYND11.HeLa 134 bp overlap

ChIP HeLa GSE51672.ZMYND11.HeLa 86 bp overlap

ZNF141 1 dataset

ChIP HEK293T GSE78099.ZNF141.HEK293T 149 bp overlap

ChIP HEK293T GSE78099.ZNF2.HEK293T 190 bp overlap

ZNF563 1 dataset

ChIP HEK293 GSE76494.ZNF563.HEK293 93 bp overlap

ZNF667 1 dataset

ChIP HEK293 GSE76494.ZNF667.HEK293 93 bp overlap

ZNF90 1 dataset

ChIP HEK293T GSE78099.ZNF90.HEK293T 109 bp overlap