chr16 : 49,275,042 – 49,275,643
601 bp 70 TFs 3 linked genes
This 601 bp open chromatin element is linked to ENSG00000287469, CBLN1, and ENSG00000279249 and is bound by 70 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287469 at TSS At TSS Proximity
CBLN1 6.2 kb Proximal Proximity
ENSG00000279249 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:49,270,042 – 49,280,643
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 482 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 411 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 551 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 601 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 601 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 196 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 175 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 168 bp overlap
BRD4 4 datasets
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 217 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 601 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 280 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 539 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 305 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 252 bp overlap
CTCF 2 datasets
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 255 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 460 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 146 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 390 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 232 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 601 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 213 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 201 bp overlap
ESR1 1 dataset
ChIP Ishikawa GSE99905.ESR1.Ishikawa 291 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 123 bp overlap
EZH2 29 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 353 bp overlap
ChIP A673 ENCFF790MVL 545 bp overlap
ChIP A673 ENCFF790MVL 322 bp overlap
ChIP A673 ENCFF955JRZ 545 bp overlap
ChIP A673 ENCFF955JRZ 322 bp overlap
ChIP GM23338 ENCFF613YON 200 bp overlap
ChIP GM23338 ENCFF613YON 330 bp overlap
ChIP GM23338 ENCFF613YON 131 bp overlap
ChIP GM23338 ENCFF886DXX 303 bp overlap
ChIP H1 ENCFF232NZA 601 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 466 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 411 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 397 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 601 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 135 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 287 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 241 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 477 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 386 bp overlap
ChIP hESC GSE113817.EZH2.hESC 229 bp overlap
ChIP hepatocyte ENCFF552DZB 582 bp overlap
ChIP hepatocyte ENCFF552DZB 601 bp overlap
ChIP hepatocyte ENCFF552DZB 396 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 91 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 461 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 257 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 299 bp overlap
ChIP neural progenitor cell ENCFF018MKA 332 bp overlap
ChIP neural progenitor cell ENCFF472NFV 601 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 241 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 601 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 222 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 297 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 173 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 448 bp overlap
JARID2 7 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 601 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 551 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 601 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 586 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 601 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 601 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 601 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 578 bp overlap
ChIP H1 ENCFF078LED 431 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 355 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 190 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 284 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 107 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 163 bp overlap
MAX 3 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 578 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 568 bp overlap
ChIP WTC11 ENCFF223QFY 585 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 446 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 298 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 215 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 535 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 215 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 171 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 278 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 601 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 149 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 368 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 397 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 405 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 413 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 407 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 335 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 311 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 530 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 238 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 269 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 581 bp overlap
RAD21 1 dataset
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 287 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 285 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 142 bp overlap
RNF2 2 datasets
ChIP WA01 GSE104690.RNF2.WA01 575 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 601 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 469 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 570 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 300 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 201 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 601 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 360 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 288 bp overlap
SMARCA4 2 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 134 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 180 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 194 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 362 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 160 bp overlap
SMC3 3 datasets
ChIP neural ENCSR404BPV.SMC3.neural 465 bp overlap
ChIP neural cell ENCFF795YGY 517 bp overlap
ChIP neural cell ENCFF795YGY 412 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 291 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 446 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 436 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 265 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 151 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 297 bp overlap
SUZ12 5 datasets
ChIP H1 ENCFF881NFR 601 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 282 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 138 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 255 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 367 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 182 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 197 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 234 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 391 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 237 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 463 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 556 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 94 bp overlap
ChIP K562 ENCFF255RZG 135 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 311 bp overlap
ZNF44 1 dataset
ChIP HEK293T GSE78099.ZNF44.HEK293T 166 bp overlap
ZNF572 1 dataset
ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 175 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 316 bp overlap
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