chr15 : 98,282,395 – 98,283,562
1,167 bp 107 TFs 1 linked gene
This 1.2 kb open chromatin element is linked to ENSG00000259199 and is bound by 107 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000259199 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:98,277,395 – 98,288,562
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
107 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_Veh GSE125245.AR.LNCaP_Veh 141 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 1094 bp overlap
BRD4 3 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 701 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 204 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 92 bp overlap
Bcl11B 2 datasets
Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 582 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 261 bp overlap
CDK9 1 dataset
ChIP A-375 GSE128080.CDK9.A-375 263 bp overlap
CHD7 3 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 519 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 292 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 981 bp overlap
DMRTA2 2 datasets
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
EBF1 1 dataset
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_60h DE_60h-EBF3_MA1637.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 571 bp overlap
ERF::HOXB13 2 datasets
Motif DE_60h DE_60h-ERFHOXB13_MA1937.2 13 bp overlap
Motif DE_72h DE_72h-ERFHOXB13_MA1937.2 13 bp overlap
ERG 4 datasets
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 256 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 159 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 157 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 147 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 137 bp overlap
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 304 bp overlap
ETV1 1 dataset
ChIP A-375 GSE80443.ETV1.A-375 561 bp overlap
Ebf2 1 dataset
Motif DE_60h DE_60h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
FLI1 9 datasets
ChIP A-673 GSE99959.FLI1.A-673 257 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 859 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 659 bp overlap
ChIP A-673_D10 GSE129155.FLI1.A-673_D10 257 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 733 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 806 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 885 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 370 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 130 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 356 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 138 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 556 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 358 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 360 bp overlap
ChIP DE DE-FOXA2-1 805 bp overlap
ChIP DE DE-FOXA2-2 783 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 477 bp overlap
Foxq1 2 datasets
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
Motif DE_72h DE_72h-Foxq1_MA0040.2 10 bp overlap
GATA1 4 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 305 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 196 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 341 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 129 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 298 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 177 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 10 datasets
ChIP DE DE-GATA4-1 719 bp overlap
ChIP DE DE-GATA4-2 888 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 349 bp overlap
ChIP foregut GSE117136.GATA4.foregut 819 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 616 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 616 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 747 bp overlap
ChIP DE DE-GATA6-2 939 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 909 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 553 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 443 bp overlap
ChIP foregut GSE117136.GATA6.foregut 843 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 708 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 394 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 318 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 569 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 54 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HNF1A 1 dataset
ChIP HEE_5 GSE76376.HNF1A.HEE_5 142 bp overlap
HNF1B 3 datasets
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
Motif DE_72h DE_72h-HNF1B_MA0153.2 13 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 487 bp overlap
HOXD12::ELK1 2 datasets
Motif DE_60h DE_60h-HOXD12ELK1_MA1958.2 13 bp overlap
Motif DE_72h DE_72h-HOXD12ELK1_MA1958.2 13 bp overlap
IKZF1 2 datasets
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 272 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 189 bp overlap
IRF7 1 dataset
Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap
Irf1 1 dataset
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
Isl1 2 datasets
Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap
Motif DE_72h DE_72h-Isl1_MA1608.2 7 bp overlap
KDM1A 6 datasets
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 237 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 244 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 528 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 132 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 291 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 158 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 284 bp overlap
MAX 1 dataset
ChIP melanocyte GSE115845.MAX.melanocyte 186 bp overlap
MEF2C 1 dataset
Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap
MEIS1 4 datasets
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 330 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_72h DE_72h-MGAEVX1_MA1960.2 11 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 365 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 276 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 357 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 345 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 948 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 686 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 587 bp overlap
Mecom 2 datasets
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
Msgn1 2 datasets
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 244 bp overlap
NEUROG2 2 datasets
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_72h DE_72h-NEUROG2_MA1642.2 7 bp overlap
NFATC3 1 dataset
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 101 bp overlap
NR1D1 2 datasets
Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap
Motif DE_72h DE_72h-NR1D1_MA1531.2 14 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 550 bp overlap
Nfatc1 1 dataset
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap
PAX1 1 dataset
Motif DE_60h DE_60h-PAX1_MA0779.2 16 bp overlap
PAX6 2 datasets
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 360 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 231 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 458 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 450 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 299 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 294 bp overlap
Prdm15 1 dataset
Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap
Prdm4 3 datasets
Motif DE_60h DE_60h-Prdm4_MA1647.3 11 bp overlap
Motif DE_60h DE_60h-Prdm4_MA1647.3 11 bp overlap
Motif DE_72h DE_72h-Prdm4_MA1647.3 11 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 107 bp overlap
ChIP K562 ENCFF248CGR 167 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 116 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 204 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 170 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 360 bp overlap
RUNX1 7 datasets
ChIP 697 GSE138031.RUNX1.697 154 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 176 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 176 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 328 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 375 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 375 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 328 bp overlap
RUNX2 2 datasets
Motif DE_60h DE_60h-RUNX2_MA0511.2 9 bp overlap
Motif DE_72h DE_72h-RUNX2_MA0511.2 9 bp overlap
RUNX3 2 datasets
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
RXRB 2 datasets
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
Motif DE_72h DE_72h-RXRB_MA0855.1 14 bp overlap
Rhox11 2 datasets
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap
Runx1 2 datasets
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
Motif DE_72h DE_72h-Runx1_MA0002.3 9 bp overlap
Rxra 2 datasets
Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap
Motif DE_72h DE_72h-Rxra_MA0512.2 14 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 91 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 146 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 708 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 652 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 850 bp overlap
SMAD3 2 datasets
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 173 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 238 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 567 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 467 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 338 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 732 bp overlap
SPI1 3 datasets
ChIP K-562 GSE70482.SPI1.K-562 168 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 97 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 153 bp overlap
SREBF2 2 datasets
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
Motif DE_72h DE_72h-SREBF2_MA0596.1 10 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 342 bp overlap
STAT1::STAT2 1 dataset
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 187 bp overlap
Stat2 1 dataset
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 469 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 389 bp overlap
TAL1 5 datasets
ChIP CD34 GSE52924.TAL1.CD34 146 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 518 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 122 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 170 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 165 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 521 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 317 bp overlap
TP53 1 dataset
ChIP UACC-257_2h_4GY GSE100292.TP53.UACC-257_2h_4GY 390 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 193 bp overlap
ZNF136 1 dataset
Motif DE_60h DE_60h-ZNF136_MA1588.1 15 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 297 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF652 2 datasets
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF680 1 dataset
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
ZNF766 2 datasets
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
ZNF85 1 dataset
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
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