chr13 : 101,866,781 – 101,868,006

1,225 bp 77 TFs 0 linked genes

This 1.2 kb open chromatin element has no linked target genes and is bound by 77 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 120 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 283 bp overlap

BRD4 1 dataset

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

CEBPA 2 datasets

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap

CEBPD 2 datasets

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap

CEBPG 2 datasets

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 192 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCFF432ZEW 305 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 251 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

EBF3 1 dataset

Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap

Ebf2 1 dataset

Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap

FOXA1 1 dataset

ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 169 bp overlap

FOXD2 2 datasets

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000BNR.HDAC2.WA01 118 bp overlap

HLF 2 datasets

Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap

Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap

HSF4 1 dataset

Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap

JUN 1 dataset

ChIP HUES-8 GSE109524.JUN.HUES-8 311 bp overlap

KLF4 1 dataset

ChIP hiPSC GSE56567.KLF4.hiPSC 156 bp overlap

MED1 1 dataset

ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 523 bp overlap

MYC 1 dataset

ChIP P493-6 GSE77061.MYC.P493-6 168 bp overlap

NANOG 5 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 143 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 550 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 375 bp overlap

ChIP hESC GSE18292.NANOG.hESC 108 bp overlap

NFIL3 2 datasets

Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap

Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap

NOTCH1 1 dataset

ChIP CD34 GSE63010.NOTCH1.CD34 91 bp overlap

NR1I2 1 dataset

Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap

ONECUT1 1 dataset

ChIP H9 ERP004206.ONECUT1.H9 191 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 385 bp overlap

POU1F1 2 datasets

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 3 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 253 bp overlap

POU3F1 2 datasets

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F3 2 datasets

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU5F1 6 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 855 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 169 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 496 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 213 bp overlap

POU5F1B 2 datasets

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Pgr 2 datasets

Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap

Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap

RAD21 1 dataset

ChIP HEC-1-B GSE139679.RAD21.HEC-1-B 180 bp overlap

RARA 1 dataset

Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

RELA 1 dataset

Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 222 bp overlap

RORA 1 dataset

Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap

RXR 1 dataset

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 50 bp overlap

RXRA::VDR 1 dataset

Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap

Rarb 1 dataset

Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 300 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 265 bp overlap

SMARCA4 3 datasets

ChIP HeLa GSE137250.SMARCA4.HeLa 336 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 332 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 466 bp overlap

SMARCB1 3 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 510 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 241 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 501 bp overlap

SMARCC1 3 datasets

ChIP ESC S25-ESC-d0-BAF155-exp1 287 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 325 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 489 bp overlap

SMC3 1 dataset

ChIP neural cell ENCFF795YGY 495 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 259 bp overlap

STAT1 1 dataset

Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 166 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 219 bp overlap

Tfcp2l1 1 dataset

Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap

ZFP14 1 dataset

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZKSCAN3 1 dataset

Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap

ZNF136 1 dataset

Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF35 1 dataset

Motif ES_0h ES_0h-ZNF35_MA2333.1 7 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF667 1 dataset

Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap

ZNF677 1 dataset

Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF75A 2 datasets

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap

Zic1::Zic2 1 dataset

Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap

Zic3 1 dataset

Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap