chr13 : 90,032,771 90,033,423
652 bp 59 TFs 0 linked genes
This 652 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:90,027,771 – 90,038,423
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 271 bp overlap
AR 18 datasets
ChIP LNCaP GSE110655.AR.LNCaP 205 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 336 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 210 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 370 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 371 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 87 bp overlap
ChIP LNCaP_M253K_shFOXA1_Ethanol GSE128883.AR.LNCaP_M253K_shFOXA1_Ethanol 243 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 64 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 71 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 256 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 153 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 156 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 249 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 187 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 129 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 83 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 53 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 119 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 282 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 68 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 163 bp overlap
BRD4 11 datasets
ChIP 22Rv1_DHT-ABBV-075 GSE118247.BRD4.22Rv1_DHT-ABBV-075 184 bp overlap
ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 652 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 209 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 257 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 178 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 652 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 305 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 559 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.BRD4.LNCaP-clone-FGC_DHT-DMSO 247 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 652 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 641 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF733JGD 261 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CHD1 2 datasets
ChIP K562 ENCFF118VJV 481 bp overlap
ChIP K562 ENCFF118VJV 470 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap
CTCF 6 datasets
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 334 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 204 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 272 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 400 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 360 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 185 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 238 bp overlap
ChIP BLaER1 ENCFF460KDD 264 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 335 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 425 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 150 bp overlap
ERG 2 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 195 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 117 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 300 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 177 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 83 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 280 bp overlap
FOXA1 6 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 203 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_GFP_shFOXA1_Ethanol 139 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 87 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 224 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 125 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 74 bp overlap
GATA1 1 dataset
ChIP K-562 ENCSR000EWM.GATA1.K-562 247 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 557 bp overlap
HOXB13 3 datasets
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 58 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 63 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 204 bp overlap
IRF2 1 dataset
ChIP K562 ENCFF430OKF 242 bp overlap
KAT2B 1 dataset
ChIP K562 ENCFF051ZFX 114 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 227 bp overlap
KDM5B 4 datasets
ChIP K562 ENCFF049WWX 472 bp overlap
ChIP K562 ENCFF049WWX 430 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 121 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 218 bp overlap
MED1 3 datasets
ChIP VCaP GSE148358.MED1.VCaP 361 bp overlap
ChIP VCaP_Darolutamide GSE148358.MED1.VCaP_Darolutamide 344 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 387 bp overlap
MYNN 1 dataset
ChIP K562 ENCFF364UTW 140 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 205 bp overlap
NELFE 2 datasets
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 106 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 200 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 148 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 210 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 371 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 236 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 241 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 240 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 455 bp overlap
SAP30 2 datasets
ChIP K562 ENCFF652WJB 198 bp overlap
ChIP K562 ENCFF652WJB 406 bp overlap
SETDB1 3 datasets
ChIP K-562 ENCSR000EWI.SETDB1.K-562 176 bp overlap
ChIP K562 ENCFF527TGQ 208 bp overlap
ChIP K562 ENCFF527TGQ 278 bp overlap
SMC1 1 dataset
ChIP IMR-90_G GSE118494.SMC1.IMR-90_G 138 bp overlap
SNRNP70 2 datasets
ChIP K562 ENCFF470XDL 295 bp overlap
ChIP K562 ENCFF716CUK 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 350 bp overlap
SRSF3 3 datasets
ChIP K-562 GSE120104.SRSF3.K-562 614 bp overlap
ChIP K562 ENCFF031SIK 401 bp overlap
ChIP K562 ENCFF031SIK 208 bp overlap
STAG1 2 datasets
ChIP K-562 ENCSR153HNT.STAG1.K-562 130 bp overlap
ChIP K-562 ENCSR153HNT.STAG1.K-562 181 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 182 bp overlap
TAF15 2 datasets
ChIP K562 ENCFF017MQV 391 bp overlap
ChIP K562 ENCFF017MQV 299 bp overlap
TARDBP 2 datasets
ChIP K-562 GSE120104.TARDBP.K-562 263 bp overlap
ChIP K-562 ENCSR429XTR.TARDBP.K-562 231 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 368 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 348 bp overlap
TRIM24 2 datasets
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 272 bp overlap
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 627 bp overlap
YY1 2 datasets
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 332 bp overlap
ChIP K-562 ENCSR000EWF.YY1.K-562 124 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 652 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 139 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ZNF263 2 datasets
ChIP K-562 ENCSR000EWN.ZNF263.K-562 242 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 263 bp overlap