chr1 : 23,902,761 23,903,123
362 bp 58 TFs 0 linked genes
This 362 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:23,897,761 – 23,908,123
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 354 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 362 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 362 bp overlap
BRD4 13 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 156 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 155 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 362 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 75 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 185 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 63 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 56 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 293 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 362 bp overlap
ChIP hESC GSE33281.BRD4.hESC 130 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 57 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 115 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 362 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 116 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 106 bp overlap
CTCF 2 datasets
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 60 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 99 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 216 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 213 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 124 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 362 bp overlap
ERG 4 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 346 bp overlap
ChIP K-562 GSE23730.ERG.K-562 331 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 325 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 89 bp overlap
ESR1 1 dataset
ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 260 bp overlap
EZH2 30 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 79 bp overlap
ChIP GM23248 ENCFF404ZHM 55 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 204 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 69 bp overlap
ChIP H1 ENCFF232NZA 159 bp overlap
ChIP H1 ENCFF232NZA 362 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 362 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 362 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 92 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 158 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 283 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 362 bp overlap
ChIP astrocyte ENCFF365JTP 362 bp overlap
ChIP astrocyte ENCFF365JTP 362 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 362 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 362 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 362 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 195 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 109 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 124 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 82 bp overlap
ChIP fibroblast of lung ENCFF479BAW 264 bp overlap
ChIP hESC GSE113817.EZH2.hESC 115 bp overlap
ChIP hESC GSE113817.EZH2.hESC 100 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 115 bp overlap
ChIP hepatocyte ENCFF118DKH 104 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 146 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 227 bp overlap
ChIP neural progenitor cell ENCFF018MKA 134 bp overlap
ChIP neural progenitor cell ENCFF472NFV 362 bp overlap
EZH2_phosphoT487 4 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 70 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 206 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 51 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 231 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 102 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 67 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 362 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 362 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 362 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 362 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 244 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 211 bp overlap
KDM4A 4 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 299 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 189 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 362 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 362 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 160 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 257 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 250 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 57 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 215 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 198 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 262 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 115 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 362 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 362 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 108 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 88 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 237 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 117 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 362 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 238 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 86 bp overlap
POU5F1 3 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 98 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 362 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 125 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 257 bp overlap
RAD21 2 datasets
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
REST 1 dataset
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 101 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 81 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 362 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 362 bp overlap
RUNX1 3 datasets
ChIP AML GSE111821.RUNX1.AML 256 bp overlap
ChIP AML_bone-marrow GSE111821.RUNX1.AML_bone-marrow 94 bp overlap
ChIP H9_DOX-5_HA GSE137670.RUNX1.H9_DOX-5_HA 175 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 362 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 183 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 80 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 241 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 362 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 362 bp overlap
STAT3 3 datasets
ChIP WA01 ERP004237.STAT3.WA01 62 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 109 bp overlap
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 52 bp overlap
SUZ12 6 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 362 bp overlap
ChIP H1 ENCFF881NFR 277 bp overlap
ChIP H1 ENCFF881NFR 358 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 258 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 106 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 362 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 69 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 362 bp overlap
TP63 3 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 186 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 221 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 61 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 362 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 150 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 362 bp overlap
YY1 2 datasets
ChIP GM12891 ENCFF460SIS 325 bp overlap
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 186 bp overlap
ZBTB7A 2 datasets
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 244 bp overlap
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 297 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 362 bp overlap