Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 218 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 165 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 327 bp overlap

BRD4 1 dataset

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 199 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 336 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 336 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 242 bp overlap

EP300 3 datasets

ChIP H1 ENCFF927IYK 269 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 188 bp overlap

ChIP hESC GSE17917.EP300.hESC 273 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 254 bp overlap

ChIP DE DE-FOXA2-2 189 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 198 bp overlap

GATA6 1 dataset

ChIP DE DE-GATA6-1 267 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 326 bp overlap

HDAC2 3 datasets

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 306 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 259 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 223 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 279 bp overlap

MAX 4 datasets

ChIP H1 ENCFF601FOM 289 bp overlap

ChIP H1 ENCFF914VQY 124 bp overlap

ChIP NCI-H128 GSE41105.MAX.NCI-H128 150 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 271 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 336 bp overlap

MXI1 2 datasets

ChIP H1 ENCFF963FZS 299 bp overlap

ChIP WA01 ENCSR000EBR.MXI1.WA01 184 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 336 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 336 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 200 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 336 bp overlap

ChIP hESC GSE18292.NANOG.hESC 117 bp overlap

PAX3-FOXO1 2 datasets

ChIP Hs-352-Sk GSE83725.PAX3-FOXO1.Hs-352-Sk 122 bp overlap

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 223 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 154 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 336 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 336 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 336 bp overlap

RAD21 1 dataset

ChIP HAP1 GSE152721.RAD21.HAP1 136 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 325 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 328 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 234 bp overlap

ChIP neural cell ENCFF882LXX 336 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 266 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 238 bp overlap

SIN3A 6 datasets

ChIP H1 ENCFF042ZSL 336 bp overlap

ChIP H1 ENCFF896IJG 299 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 262 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 211 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 302 bp overlap

ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 247 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 326 bp overlap

SMARCA4 5 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 311 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 327 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 331 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 336 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 296 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 222 bp overlap

SMARCC1 2 datasets

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 159 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 238 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 299 bp overlap

SOX2 7 datasets

ChIP H9 GSE46837.SOX2.H9 183 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 239 bp overlap

ChIP NPC GSE122631.SOX2.NPC 200 bp overlap

ChIP hESC GSE69479.SOX2.hESC 242 bp overlap

ChIP hESC GSE18292.SOX2.hESC 75 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 336 bp overlap

ChIP hiPSC GSE67282.SOX2.hiPSC 253 bp overlap

SOX21 1 dataset

ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 237 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 185 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 276 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 200 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 319 bp overlap

TEAD4 4 datasets

ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 315 bp overlap

ChIP ESC S26-ESC-d0-TEAD4-exp1 336 bp overlap

ChIP H1 ENCFF778PAX 114 bp overlap

ChIP hESC GSE99202.TEAD4.hESC 234 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 336 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 336 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 336 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 305 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 223 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 323 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 288 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 333 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
FRY		5.2 kb	Proximal	Proximity
FRY-AS1		5.5 kb	Proximal	Proximity

Genome Browser