chr12 : 80,400,566 80,401,031
465 bp 55 TFs 0 linked genes
This 465 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:80,395,566 – 80,406,031
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP GSE80256.AR.LNCaP 50 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 173 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 290 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 174 bp overlap
ARID2 4 datasets
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 465 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 465 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 271 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 73 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 340 bp overlap
BRD4 5 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 286 bp overlap
ChIP hESC GSE33281.BRD4.hESC 118 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 427 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 315 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 281 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 286 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 325 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 58 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 258 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CTCF 6 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 268 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 332 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 439 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 158 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 235 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 239 bp overlap
DPF2 4 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 465 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 59 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 200 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 452 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 250 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 259 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 216 bp overlap
ESR1 9 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 264 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 422 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 259 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 388 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 213 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 161 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 465 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 243 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 244 bp overlap
EZH2 2 datasets
ChIP T98G GSE112240.EZH2.T98G 126 bp overlap
ChIP T98G GSE112240.EZH2.T98G 112 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 332 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 308 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 310 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 265 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 297 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 275 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE83671.KMT2A.THP-1 298 bp overlap
KMT2C 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 465 bp overlap
KMT2D 2 datasets
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 465 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 361 bp overlap
MECOM 1 dataset
ChIP SKH1_E2 GSE102697.MECOM.SKH1_E2 215 bp overlap
MED1 2 datasets
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 158 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 151 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 329 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 259 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 123 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 205 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 183 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 250 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 444 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 397 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 328 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 372 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 269 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 211 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 262 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 235 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 119 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 247 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 378 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 259 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 311 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 465 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 465 bp overlap
SMARCC1 4 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 91 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 465 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 354 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 465 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 170 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 289 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 413 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 465 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 307 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 169 bp overlap
TET2 1 dataset
ChIP Jurkat_RUNX1KD GSE85524.TET2.Jurkat_RUNX1KD 223 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 239 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 205 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 280 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 395 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 257 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 59 bp overlap