chr12 : 76,698,903 – 76,699,365

462 bp 75 TFs 0 linked genes

This 462 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

75 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 189 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 139 bp overlap

BRD4 2 datasets

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 203 bp overlap

Bach1::Mafk 1 dataset

Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 140 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 297 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 128 bp overlap

CREB3 1 dataset

Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap

CREB3L1 1 dataset

Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap

CREB3L4 1 dataset

Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap

CTCF 4 datasets

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap

ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 295 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 162 bp overlap

Creb3l2 1 dataset

Motif DE_12h DE_12h-Creb3l2_MA0608.1 9 bp overlap

EGR1 1 dataset

Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap

EGR2 1 dataset

Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap

EGR3 1 dataset

Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap

ESR1 1 dataset

ChIP MCF-7 GSE68356.ESR1.MCF-7 269 bp overlap

ESR1_Y537S 1 dataset

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 193 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 212 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 218 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 438 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap

KLF4 1 dataset

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

MAF 1 dataset

Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap

MAF::NFE2 1 dataset

Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap

MAFA 1 dataset

Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap

MEF2C 1 dataset

Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 255 bp overlap

MYOD1 3 datasets

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

ChIP RD GSE137168.MYOD1.RD 211 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap

MYOG 1 dataset

ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 176 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NKX2-2 1 dataset

Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap

NR3C1 1 dataset

ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 265 bp overlap

PAX3-FOXO1 2 datasets

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 220 bp overlap

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 274 bp overlap

PDX1 1 dataset

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 66 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 248 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RAD21 1 dataset

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 186 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 373 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 270 bp overlap

RCOR1 1 dataset

ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 83 bp overlap

RREB1 1 dataset

Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 170 bp overlap

SMARCA4 2 datasets

ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 171 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 208 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap

SNAI2 4 datasets

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

ChIP RD GSE137168.SNAI2.RD 219 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 281 bp overlap

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 201 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 229 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 150 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 443 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap

TFAP2C 2 datasets

Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 334 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 1 dataset

Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap

XBP1 1 dataset

Motif DE_12h DE_12h-XBP1_MA0844.2 11 bp overlap

YY1AP1 1 dataset

ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 171 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF324 1 dataset

Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF343 1 dataset

Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap

ZNF384 1 dataset

Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF574 1 dataset

ChIP HEK293 GSE76494.ZNF574.HEK293 218 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap