chr12 : 66,746,526 – 66,746,939

413 bp 116 TFs 0 linked genes

This 413 bp open chromatin element has no linked target genes and is bound by 116 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

116 transcription factors

ALX3 1 dataset

Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap

ARGFX 1 dataset

Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap

Alx1 1 dataset

Motif DE_36h DE_36h-Alx1_MA0854.2 8 bp overlap

Alx4 1 dataset

Motif DE_36h DE_36h-Alx4_MA0853.2 12 bp overlap

Arx 1 dataset

Motif DE_36h DE_36h-Arx_MA0874.2 10 bp overlap

BCL6 1 dataset

ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 116 bp overlap

Bach1::Mafk 1 dataset

Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap

CTCF 1 dataset

Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap

CTCFL 1 dataset

Motif DE_36h DE_36h-CTCFL_MA1102.3 8 bp overlap

DRGX 1 dataset

Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap

DUX4 2 datasets

ChIP HEK293 GSE75791.DUX4.HEK293 235 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 329 bp overlap

EMX1 1 dataset

Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap

EMX2 1 dataset

Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap

EN1 1 dataset

Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap

EN2 1 dataset

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 378 bp overlap

ESX1 1 dataset

Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 269 bp overlap

EVX1 1 dataset

Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap

EVX2 1 dataset

Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap

FEZF1 2 datasets

ChIP HEK293 ENCFF528YED 59 bp overlap

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 413 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 403 bp overlap

ChIP DE DE-FOXA2-2 413 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 167 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 413 bp overlap

ChIP DE DE-GATA4-2 413 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 400 bp overlap

ChIP DE DE-GATA6-2 413 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 413 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 410 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 413 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 413 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 413 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 413 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 388 bp overlap

GBX1 1 dataset

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 300 bp overlap

GSX1 1 dataset

Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap

GSX2 1 dataset

Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

HIC2 1 dataset

Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap

HOXA1 1 dataset

Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap

HOXA2 1 dataset

Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap

HOXA3 1 dataset

Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap

HOXB1 1 dataset

Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap

HOXB2 1 dataset

Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap

HOXB3 1 dataset

Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap

HOXB5 1 dataset

Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap

HOXC8 1 dataset

Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap

HOXD3 1 dataset

Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCFF518OXG 264 bp overlap

INSM1 1 dataset

Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap

ISX 1 dataset

Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 387 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 301 bp overlap

KLF8 1 dataset

ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 95 bp overlap

LBX1 1 dataset

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LHX2 1 dataset

ChIP retina_pigment GSE60024.LHX2.retina_pigment 304 bp overlap

LHX5 1 dataset

Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap

LHX6 1 dataset

Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap

LHX9 1 dataset

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

LMX1A 1 dataset

Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap

LMX1B 1 dataset

Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap

Lhx1 1 dataset

Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap

Lhx4 1 dataset

Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap

Lhx8 1 dataset

Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap

MAF::NFE2 1 dataset

Motif DE_36h DE_36h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_36h DE_36h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap

MEOX1 1 dataset

Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap

MEOX2 1 dataset

Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap

MIXL1 1 dataset

Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap

MNX1 1 dataset

Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap

NANOG 1 dataset

ChIP hESC GSE18292.NANOG.hESC 100 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 319 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 318 bp overlap

NEUROG2 1 dataset

Motif DE_36h DE_36h-NEUROG2_MA0669.1 10 bp overlap

NKX6-1 1 dataset

Motif DE_36h DE_36h-NKX6-1_MA0674.2 7 bp overlap

NKX6-2 1 dataset

Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap

NOTO 1 dataset

Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap

Nfe2l2 1 dataset

Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap

OSR2 1 dataset

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 252 bp overlap

PAX4 1 dataset

Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap

PDX1 1 dataset

Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 187 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 188 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 102 bp overlap

PLAG1 1 dataset

Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 139 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 327 bp overlap

POU6F1 1 dataset

Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap

POU6F2 1 dataset

Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap

PRDM14 1 dataset

ChIP hESC GSE22767.PRDM14.hESC 182 bp overlap

PRDM6 1 dataset

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 208 bp overlap

PRRX1 1 dataset

Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap

PRRX2 1 dataset

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

RAX2 1 dataset

Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap

Runx1 1 dataset

Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap

SCRT2 1 dataset

ChIP HEK293 ENCFF711QQB 142 bp overlap

SHOX 1 dataset

Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 388 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 283 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 288 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 273 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 89 bp overlap

Shox2 1 dataset

Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 256 bp overlap

TEAD1 1 dataset

Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap

TEAD3 1 dataset

Motif DE_36h DE_36h-TEAD3_MA0808.1 8 bp overlap

TEAD4 5 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 137 bp overlap

Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap

ChIP H1 ENCFF778PAX 231 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 137 bp overlap

ChIP SNU-216 GSE44416.TEAD4.SNU-216 147 bp overlap

TLX2 1 dataset

Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap

TP53 1 dataset

ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 305 bp overlap

TWIST1 1 dataset

Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap

UNCX 1 dataset

Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap

VAX1 1 dataset

Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap

VAX2 1 dataset

Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap

VSX1 1 dataset

Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap

VSX2 1 dataset

Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 376 bp overlap

ZFP64 1 dataset

ChIP HEK293 GSE76494.ZFP64.HEK293 97 bp overlap

ZNF2 1 dataset

ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 290 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 394 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 309 bp overlap

ZNF629 1 dataset

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 105 bp overlap

ZNF664 2 datasets

ChIP HEK293 ENCFF343XSW 370 bp overlap

ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 351 bp overlap

ZNF843 2 datasets

ChIP HEK293 ENCFF241QRH 62 bp overlap

ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 298 bp overlap

ZXDB 2 datasets

ChIP HEK293 ENCFF835SGA 186 bp overlap

ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 181 bp overlap

mix-a 1 dataset

Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap