chr11 : 130,423,717 130,424,508
791 bp 77 TFs 4 linked genes
This 791 bp open chromatin element is linked to 4 target genes and is bound by 77 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ADAMTS8 4.1 kb Proximal Proximity
ZBTB44 109.0 kb Distal Multiome
ST14 264.2 kb Distal Multiome
SNX19 492.5 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:130,418,717 – 130,429,508
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 166 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 112 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 294 bp overlap
CTCF 3 datasets
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 208 bp overlap
ChIP endodermal cell ENCFF471YCZ 137 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 496 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 55 bp overlap
Crx 1 dataset
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 98 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 310 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 254 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 308 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 479 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 149 bp overlap
EZH2 6 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 336 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 168 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 72 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 61 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 415 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 284 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 340 bp overlap
ChIP DE DE-FOXA2-2 421 bp overlap
GATA2 3 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 418 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
GATA5 3 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 531 bp overlap
ChIP DE DE-GATA6-2 500 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 398 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 405 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 436 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 456 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 369 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 451 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 293 bp overlap
GSC 1 dataset
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Gata3 3 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Hand1 1 dataset
Motif DE_48h DE_48h-Hand1_MA2123.1 9 bp overlap
Hand1::Tcf3 3 datasets
Motif DE_48h DE_48h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_60h DE_60h-Hand1Tcf3_MA0092.2 9 bp overlap
Motif DE_72h DE_72h-Hand1Tcf3_MA0092.2 9 bp overlap
Isl1 1 dataset
Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap
KLF13 3 datasets
Motif DE_48h DE_48h-KLF13_MA0657.2 17 bp overlap
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
Motif DE_72h DE_72h-KLF13_MA0657.2 17 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_48h DE_48h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_48h DE_48h-MEIS3_MA0775.2 7 bp overlap
MYOG 1 dataset
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 179 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 383 bp overlap
NFATC3 1 dataset
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NFIA 1 dataset
Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap
Nfat5 1 dataset
Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
OTX1 1 dataset
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_48h DE_48h-OTX2_MA0712.3 7 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PITX1 1 dataset
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_48h DE_48h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 213 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 303 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 181 bp overlap
RHOXF1 1 dataset
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
SIX1 3 datasets
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap
Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap
SIX2 3 datasets
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 256 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 791 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 521 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 383 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 455 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 373 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 629 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 499 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 196 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 354 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 512 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 160 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 437 bp overlap
SUZ12 3 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 490 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 117 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 277 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 243 bp overlap
TBX18 3 datasets
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 554 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 554 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 408 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 296 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 417 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 315 bp overlap
TFCP2 3 datasets
Motif DE_48h DE_48h-TFCP2_MA1968.2 9 bp overlap
Motif DE_60h DE_60h-TFCP2_MA1968.2 9 bp overlap
Motif DE_72h DE_72h-TFCP2_MA1968.2 9 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 116 bp overlap
TRPS1 3 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Vdr 1 dataset
Motif DE_48h DE_48h-Vdr_MA0693.4 7 bp overlap
ZBTB7C 1 dataset
Motif DE_60h DE_60h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 353 bp overlap
ZNF24 1 dataset
Motif DE_48h DE_48h-ZNF24_MA1124.1 13 bp overlap
ZNF320 1 dataset
Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap
ZNF460 2 datasets
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF652 3 datasets
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap