chr11 : 109,858,203 – 109,858,724

521 bp 74 TFs 0 linked genes

This 521 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

ADNP 1 dataset

ChIP K562 ENCFF492SKF 51 bp overlap

ARNT2 1 dataset

Motif DE_36h DE_36h-ARNT2_MA1464.2 8 bp overlap

ARNT::HIF1A 1 dataset

Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap

Arnt 1 dataset

Motif DE_36h DE_36h-Arnt_MA0004.1 6 bp overlap

Arntl 1 dataset

Motif DE_36h DE_36h-Arntl_MA0603.2 8 bp overlap

BCL6B 1 dataset

Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap

BHLHE40 1 dataset

ChIP K-562 ENCSR000EGV.BHLHE40.K-562 127 bp overlap

BHLHE41 1 dataset

Motif DE_36h DE_36h-BHLHE41_MA0636.1 10 bp overlap

CBX3 1 dataset

ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 151 bp overlap

CHD4 2 datasets

ChIP macrophage GSE136216.CHD4.macrophage 162 bp overlap

ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 127 bp overlap

CLOCK 1 dataset

Motif DE_36h DE_36h-CLOCK_MA0819.3 7 bp overlap

DUX4 2 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 337 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 361 bp overlap

ERG 1 dataset

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 165 bp overlap

ESR2 1 dataset

Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 178 bp overlap

FOS 1 dataset

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 260 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 311 bp overlap

GATA1 1 dataset

Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 240 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 318 bp overlap

ChIP DE DE-GATA4-2 445 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 435 bp overlap

ChIP DE DE-GATA6-2 345 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 521 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 510 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 516 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 393 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 521 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 521 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 302 bp overlap

HES1 1 dataset

Motif DE_36h DE_36h-HES1_MA1099.3 8 bp overlap

HES2 1 dataset

Motif DE_36h DE_36h-HES2_MA0616.3 9 bp overlap

HES5 1 dataset

Motif DE_36h DE_36h-HES5_MA0821.2 10 bp overlap

HES6 1 dataset

Motif DE_36h DE_36h-HES6_MA1493.1 10 bp overlap

HES7 1 dataset

Motif DE_36h DE_36h-HES7_MA0822.1 12 bp overlap

HEY1 1 dataset

Motif DE_36h DE_36h-HEY1_MA0823.1 10 bp overlap

HEY2 1 dataset

Motif DE_36h DE_36h-HEY2_MA0649.2 9 bp overlap

HIF1A 1 dataset

Motif DE_36h DE_36h-HIF1A_MA1106.2 6 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

INSM1 1 dataset

Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap

MAX 3 datasets

Motif DE_36h DE_36h-MAX_MA0058.4 6 bp overlap

ChIP K562 ENCFF524IJO 362 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap

MED1 4 datasets

ChIP HCT-116 GSE121798.MED1.HCT-116 113 bp overlap

ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 57 bp overlap

ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 143 bp overlap

ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 181 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MLXIPL 1 dataset

Motif DE_36h DE_36h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif DE_36h DE_36h-MNT_MA0825.2 6 bp overlap

MYC 1 dataset

Motif DE_36h DE_36h-MYC_MA0147.4 8 bp overlap

Mlxip 1 dataset

Motif DE_36h DE_36h-Mlxip_MA0622.2 6 bp overlap

NKX2-5 1 dataset

ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 164 bp overlap

NR2C2 1 dataset

Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap

Npas2 1 dataset

Motif DE_36h DE_36h-Npas2_MA0626.2 8 bp overlap

ONECUT2 1 dataset

ChIP A-549 GSE102599.ONECUT2.A-549 327 bp overlap

PHIP 1 dataset

ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 333 bp overlap

PKNOX2 1 dataset

Motif DE_36h DE_36h-PKNOX2_MA0783.1 12 bp overlap

POU4F2 1 dataset

Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap

PRDM9 1 dataset

Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap

Plagl1 1 dataset

Motif DE_36h DE_36h-Plagl1_MA1615.2 8 bp overlap

REST 3 datasets

ChIP PFSK-1 ENCFF845VHA 181 bp overlap

ChIP PFSK1 ENCSR000BOX.REST.PFSK1 122 bp overlap

ChIP WA01 ENCSR000BHM.REST.WA01 75 bp overlap

SCRT2 1 dataset

Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap

SIX1 1 dataset

Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

SMAD2 1 dataset

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 472 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 521 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 521 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 413 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 458 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 143 bp overlap

SOHLH2 1 dataset

Motif DE_36h DE_36h-SOHLH2_MA1560.2 8 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 231 bp overlap

SP1 1 dataset

ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 165 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 216 bp overlap

TBX5 6 datasets

ChIP G296S GSE85628.TBX5.G296S 105 bp overlap

ChIP G296S_2 GSE85628.TBX5.G296S_2 105 bp overlap

ChIP G296S_4 GSE85628.TBX5.G296S_4 237 bp overlap

ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 212 bp overlap

ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 154 bp overlap

ChIP hiPSC GSE81585.TBX5.hiPSC 201 bp overlap

TCF3 1 dataset

Motif DE_36h DE_36h-TCF3_MA0522.4 7 bp overlap

TCF7L2 1 dataset

ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 159 bp overlap

TFEB 1 dataset

Motif DE_36h DE_36h-TFEB_MA0692.2 8 bp overlap

TFEC 1 dataset

Motif DE_36h DE_36h-TFEC_MA0871.3 8 bp overlap

TGIF1 1 dataset

Motif DE_36h DE_36h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_36h DE_36h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 1 dataset

Motif DE_36h DE_36h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_36h DE_36h-TGIF2LY_MA1572.1 12 bp overlap

USF1 7 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 220 bp overlap

ChIP HCT116 ENCFF330PYP 339 bp overlap

ChIP K-562 ENCSR000BKT.USF1.K-562 227 bp overlap

ChIP K562 ENCFF202SFC 400 bp overlap

ChIP K562 ENCFF633EZB 265 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 215 bp overlap

ZNF211 1 dataset

Motif DE_36h DE_36h-ZNF211_MA1974.2 10 bp overlap

ZNF460 1 dataset

Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap

ZNF530 1 dataset

Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap

ZNF582 1 dataset

Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap