chr11 : 55,956,355 55,956,903
548 bp 68 TFs 0 linked genes
This 548 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:55,951,355 – 55,961,903
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP Jurkat GSE83777.BRD4.Jurkat 548 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 512 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 532 bp overlap
CEBPD 1 dataset
Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap
CTCFL 1 dataset
Motif DE_60h DE_60h-CTCFL_MA1102.3 8 bp overlap
DMRTA2 2 datasets
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 548 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 548 bp overlap
ChIP DE DE-FOXA2-2 460 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 274 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 296 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 524 bp overlap
FOXD2 1 dataset
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 508 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 350 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 477 bp overlap
ChIP DE DE-GATA4-2 489 bp overlap
ChIP foregut GSE117136.GATA4.foregut 443 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 548 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 548 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 482 bp overlap
ChIP DE DE-GATA6-2 522 bp overlap
ChIP H9 ERP004206.GATA6.H9 338 bp overlap
ChIP foregut GSE117136.GATA6.foregut 532 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 548 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 548 bp overlap
GRHL1 1 dataset
Motif DE_60h DE_60h-GRHL1_MA0647.2 10 bp overlap
GRHL2 1 dataset
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
HLF 1 dataset
Motif DE_60h DE_60h-HLF_MA0043.4 9 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
KLF1 1 dataset
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_60h DE_60h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_60h DE_60h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_60h DE_60h-KLF7_MA1959.2 8 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 326 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 548 bp overlap
Msgn1 1 dataset
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
NFKB1 1 dataset
Motif DE_60h DE_60h-NFKB1_MA0105.4 13 bp overlap
NFKB2 1 dataset
Motif DE_60h DE_60h-NFKB2_MA0778.2 11 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 548 bp overlap
OSR1 1 dataset
Motif DE_60h DE_60h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PATZ1 1 dataset
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
Pgr 1 dataset
Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
RREB1 1 dataset
Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 458 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 332 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 200 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SP1 1 dataset
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap
SPIB 1 dataset
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
Spi1 1 dataset
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 228 bp overlap
TFCP2 1 dataset
Motif DE_60h DE_60h-TFCP2_MA1968.2 9 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 214 bp overlap
VEZF1 1 dataset
Motif DE_60h DE_60h-VEZF1_MA1578.2 6 bp overlap
ZNF148 1 dataset
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
ZNF281 2 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap
ZNF354A 1 dataset
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 226 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 144 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 152 bp overlap