chr11 : 18,455,706 – 18,455,877
171 bp 66 TFs 1 linked gene
This 171 bp open chromatin element is linked to LDHAL6A and is bound by 66 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LDHAL6A at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:18,450,706 – 18,460,877
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 3 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 82 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 148 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 161 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 162 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 133 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 149 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 171 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 171 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 131 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 125 bp overlap
CTCF 1 dataset
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 115 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 141 bp overlap
E2F6 6 datasets
ChIP H1 ENCFF785DWK 154 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 171 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 171 bp overlap
ChIP K562 ENCFF136LTS 171 bp overlap
ChIP K562 ENCFF163WMT 171 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 171 bp overlap
EGR1 5 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 171 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 171 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 171 bp overlap
ChIP K562 ENCFF006PJY 124 bp overlap
ChIP K562 ENCFF895KGN 171 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 125 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 171 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 131 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 125 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 171 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 154 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 153 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 146 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 171 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 96 bp overlap
FLI1 2 datasets
ChIP UAE GSE23730.FLI1.UAE 171 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 171 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 159 bp overlap
ChIP K562 ENCFF940JZP 171 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 171 bp overlap
INTS13 2 datasets
ChIP HL-60 GSE106359.INTS13.HL-60 171 bp overlap
ChIP HL-60_PMA GSE106359.INTS13.HL-60_PMA 171 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 132 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 171 bp overlap
ChIP K562 ENCFF320EQC 171 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 169 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 88 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 171 bp overlap
ChIP K562 ENCFF524IJO 171 bp overlap
ChIP WTC11 ENCFF223QFY 171 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 127 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 171 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 123 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 171 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 171 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 171 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 65 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 171 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 107 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 129 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 99 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 171 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 171 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 171 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 171 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 137 bp overlap
NRF1 9 datasets
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 171 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 171 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 171 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 161 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 106 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 127 bp overlap
ChIP K562 ENCFF689EWI 171 bp overlap
ChIP K562 ENCFF689EWI 171 bp overlap
ChIP K562 ENCFF791UHF 118 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 61 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 171 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 131 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 63 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 158 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 171 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 163 bp overlap
RNF2 3 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 163 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 150 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 171 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 171 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 171 bp overlap
RUNX1 4 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 166 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 171 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 166 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 171 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 148 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 171 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 116 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 171 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 152 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 77 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 148 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 171 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 171 bp overlap
SRSF3 2 datasets
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 157 bp overlap
ChIP K-562 GSE120104.SRSF3.K-562 157 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 164 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 171 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 171 bp overlap
TARDBP 1 dataset
ChIP K-562 ENCSR429XTR.TARDBP.K-562 152 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 96 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 171 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 155 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 128 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 171 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 119 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 171 bp overlap
TRIM28 2 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 171 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 140 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 171 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 171 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 98 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 117 bp overlap
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