chr1 : 195,218,425 – 195,218,958

533 bp 58 TFs 0 linked genes

This 533 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

APC 1 dataset

ChIP HCT-116 GSE103894.APC.HCT-116 293 bp overlap

AR 4 datasets

ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 358 bp overlap

ChIP MCF-7 GSE48930.AR.MCF-7 417 bp overlap

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 171 bp overlap

ARNT 1 dataset

ChIP 501-mel GSE95280.ARNT.501-mel 292 bp overlap

ARNTL 1 dataset

ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 203 bp overlap

BCL6 1 dataset

ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 390 bp overlap

BRD1 1 dataset

ChIP RKO GSE47190.BRD1.RKO 113 bp overlap

BRD4 2 datasets

ChIP 22Rv1_DHT-ABBV-744 GSE118247.BRD4.22Rv1_DHT-ABBV-744 354 bp overlap

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 121 bp overlap

BRF2 1 dataset

ChIP IMR-90_TERT GSE38303.BRF2.IMR-90_TERT 131 bp overlap

CBFB 1 dataset

ChIP ME-1 GSE46044.CBFB.ME-1 225 bp overlap

CBX1 1 dataset

ChIP K-562 ENCSR948QLZ.CBX1.K-562 125 bp overlap

CEBPA 1 dataset

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 77 bp overlap

CHD1 1 dataset

ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 248 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 272 bp overlap

CREB1 1 dataset

ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 273 bp overlap

CRY1 1 dataset

ChIP U2OS GSE44236.CRY1.U2OS 376 bp overlap

CTCF 5 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 308 bp overlap

ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 274 bp overlap

ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 437 bp overlap

ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 423 bp overlap

ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 286 bp overlap

EBF1 1 dataset

ChIP ASC GSE54889.EBF1.ASC 131 bp overlap

EGR1 1 dataset

ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 225 bp overlap

ERG 1 dataset

ChIP SKNO-1 GSE23730.ERG.SKNO-1 214 bp overlap

ESR1 7 datasets

ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 222 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 404 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 418 bp overlap

ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 533 bp overlap

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 348 bp overlap

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 61 bp overlap

ESR1_Y537S 1 dataset

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 457 bp overlap

ETV6 1 dataset

ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 195 bp overlap

EZH2 3 datasets

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 111 bp overlap

ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 260 bp overlap

FLI1 1 dataset

ChIP SKNO-1 GSE23730.FLI1.SKNO-1 202 bp overlap

FOXA1 2 datasets

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 526 bp overlap

ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 181 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 171 bp overlap

HCFC1R1 1 dataset

ChIP cartilage GSE100311.HCFC1R1.cartilage 304 bp overlap

IFNA1 1 dataset

ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 177 bp overlap

JUN 1 dataset

ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 416 bp overlap

KDM4C 1 dataset

ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 234 bp overlap

LMO1 1 dataset

ChIP Jurkat GSE94391.LMO1.Jurkat 190 bp overlap

MCM3 1 dataset

ChIP K-562 ENCSR990AZC.MCM3.K-562 184 bp overlap

MED1 1 dataset

ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 76 bp overlap

MYB 1 dataset

ChIP Jurkat GSE59657.MYB.Jurkat 212 bp overlap

MYC 1 dataset

ChIP CD34 GSE85488.MYC.CD34 108 bp overlap

NCOA1 1 dataset

ChIP MCF-7 ERP000901.NCOA1.MCF-7 182 bp overlap

NCOA2 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 147 bp overlap

NOTCH1 2 datasets

ChIP HCC1599 GSE116871.NOTCH1.HCC1599 358 bp overlap

ChIP HCC1599_GSI GSE116871.NOTCH1.HCC1599_GSI 364 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BJR.NR3C1.A-549 143 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 161 bp overlap

POU5F1 2 datasets

ChIP BG03 GSE21614.POU5F1.BG03 231 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 105 bp overlap

RBPJ 2 datasets

ChIP HCC1599 GSE116871.RBPJ.HCC1599 268 bp overlap

ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 266 bp overlap

REST 1 dataset

ChIP PANC-1 ENCSR000BJO.REST.PANC-1 188 bp overlap

RUNX1 4 datasets

ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 292 bp overlap

ChIP Jurkat GSE85524.RUNX1.Jurkat 354 bp overlap

ChIP Jurkat GSE76181.RUNX1.Jurkat 194 bp overlap

ChIP THP-1 GSE79899.RUNX1.THP-1 185 bp overlap

SMARCB1 1 dataset

ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 170 bp overlap

SNAI2 1 dataset

ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 325 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 289 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 188 bp overlap

SPI1 3 datasets

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 271 bp overlap

ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 282 bp overlap

ChIP macrophage_IL4 GSE47188.SPI1.macrophage_IL4 316 bp overlap

SRSF3 2 datasets

ChIP K-562 GSE120104.SRSF3.K-562 98 bp overlap

ChIP K-562 ENCSR268QIQ.SRSF3.K-562 82 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 372 bp overlap

TP63 1 dataset

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 152 bp overlap

TRIM25 1 dataset

ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 138 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 365 bp overlap

ZNF143 2 datasets

ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 60 bp overlap

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 125 bp overlap

ZNF202 1 dataset

ChIP HEK293 ENCSR996FYT.ZNF202.HEK293 224 bp overlap

ZNF572 1 dataset

ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 84 bp overlap

ZNF680 3 datasets

ChIP HEK293 ENCFF418WHE 64 bp overlap

ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 125 bp overlap

ChIP HEK293 GSE76494.ZNF680.HEK293 113 bp overlap