chr10 : 101,223,495 101,223,894
399 bp 60 TFs 2 linked genes
This 399 bp open chromatin element is linked to LBX1 and LBX1-AS1 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LBX1 5.6 kb Proximal Proximity
LBX1-AS1 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:101,218,495 – 101,228,894
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 204 bp overlap
AR 2 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 81 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 317 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 191 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 189 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 79 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 399 bp overlap
BRD4 7 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 163 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 399 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 216 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 239 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 399 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 221 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 374 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 173 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 281 bp overlap
CBX8 3 datasets
ChIP H1 ENCFF095JHA 65 bp overlap
ChIP H1 ENCFF095JHA 220 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 399 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 182 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 206 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 249 bp overlap
CTCF 2 datasets
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 399 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 113 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 133 bp overlap
ChIP BLaER1 ENCFF460KDD 312 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 57 bp overlap
EED 2 datasets
ChIP ProEs GSE59087.EED.ProEs 298 bp overlap
ChIP ProEs GSE59087.EED.ProEs 50 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 202 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 399 bp overlap
ChIP breast_tumor_Male_12 GSE104399.ESR1.breast_tumor_Male_12 123 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 98 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 229 bp overlap
EZH2 24 datasets
ChIP A673 ENCFF790MVL 272 bp overlap
ChIP A673 ENCFF790MVL 170 bp overlap
ChIP A673 ENCFF955JRZ 296 bp overlap
ChIP A673 ENCFF955JRZ 191 bp overlap
ChIP GM23248 ENCFF404ZHM 154 bp overlap
ChIP GM23248 ENCFF506FWX 169 bp overlap
ChIP GM23338 ENCFF613YON 399 bp overlap
ChIP GM23338 ENCFF886DXX 399 bp overlap
ChIP H1 ENCFF232NZA 399 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 399 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 198 bp overlap
ChIP astrocyte ENCFF365JTP 399 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 146 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 97 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 399 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 283 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 399 bp overlap
ChIP fibroblast of lung ENCFF479BAW 399 bp overlap
ChIP hepatocyte ENCFF552DZB 399 bp overlap
ChIP keratinocyte ENCFF070STK 164 bp overlap
ChIP neural cell ENCFF610EPB 321 bp overlap
ChIP neural progenitor cell ENCFF018MKA 399 bp overlap
ChIP neural progenitor cell ENCFF472NFV 399 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 129 bp overlap
GABPA 2 datasets
ChIP H1 ENCFF739QFD 341 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 139 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 246 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 258 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 399 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 399 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 399 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 354 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 213 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 283 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 354 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 312 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 191 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 399 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 236 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 59 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 169 bp overlap
MTF2 2 datasets
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 268 bp overlap
ChIP HepG2 ENCFF916FZN 161 bp overlap
MYC 1 dataset
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 213 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 346 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 350 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 385 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 204 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 206 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 399 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 384 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 334 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 399 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 399 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 399 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 399 bp overlap
ChIP Hep-G2 ENCSR523XCR.RNF2.Hep-G2 287 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 327 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 120 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 246 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 399 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 387 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 164 bp overlap
SMARCA4 1 dataset
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 258 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 282 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 154 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 399 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 161 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 305 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 52 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 214 bp overlap
SUZ12 7 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 399 bp overlap
ChIP H1 ENCFF507HGF 148 bp overlap
ChIP H1 ENCFF507HGF 175 bp overlap
ChIP H1 ENCFF881NFR 399 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 184 bp overlap
ChIP NT2/D1 ENCFF574SXS 288 bp overlap
ChIP hMSC GSE125166.SUZ12.hMSC 399 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 88 bp overlap
TP63 3 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 228 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 210 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 399 bp overlap
ZFX 2 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 397 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 308 bp overlap
ZNF512 2 datasets
ChIP WTC11 ENCFF086TTM 286 bp overlap
ChIP WTC11 ENCFF086TTM 311 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 101 bp overlap