chr10 : 48,274,619 48,275,163
544 bp 67 TFs 2 linked genes
This 544 bp open chromatin element is linked to FRMPD2 and MAPK8 and is bound by 67 transcription factors.
Linked Genes
2 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
FRMPD2 at TSS At TSS Proximity
MAPK8 31.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:48,269,619 – 48,280,163
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE63202.AR.LNCaP 160 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 214 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 240 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 393 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 256 bp overlap
CREB1 2 datasets
Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 382 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 373 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 305 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 399 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 444 bp overlap
CTCF 4 datasets
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 152 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 392 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 511 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 499 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 275 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 305 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 350 bp overlap
ESR1 6 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 440 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 239 bp overlap
ChIP MCF-7_E2-ICI GSE67295.ESR1.MCF-7_E2-ICI 171 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 277 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 152 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 540 bp overlap
EZH2 2 datasets
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 121 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 184 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 119 bp overlap
FOXA1 4 datasets
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 173 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 136 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 252 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 261 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 365 bp overlap
ChIP DE DE-FOXA2-2 400 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 297 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 175 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 294 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 309 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 240 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 183 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 163 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 239 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 385 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 215 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 443 bp overlap
ChIP DE DE-GATA4-2 517 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 413 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 435 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 316 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 399 bp overlap
ChIP DE DE-GATA6-2 544 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 370 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 489 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 376 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 454 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 528 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 389 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 398 bp overlap
ChIP foregut GSE117136.GATA6.foregut 295 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 419 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 236 bp overlap
HIC2 2 datasets
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
Motif DE_60h DE_60h-HIC2_MA0738.2 6 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 427 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 201 bp overlap
Lef1 2 datasets
Motif DE_36h DE_36h-Lef1_MA0768.3 8 bp overlap
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 463 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 482 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 384 bp overlap
MEIS1 4 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 151 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 160 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 177 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 317 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 185 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 180 bp overlap
NFKB2 3 datasets
Motif DE_36h DE_36h-NFKB2_MA0778.2 11 bp overlap
Motif DE_60h DE_60h-NFKB2_MA0778.2 11 bp overlap
ChIP L1236 GSE63736.NFKB2.L1236 172 bp overlap
NFYA 1 dataset
Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 544 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 266 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 260 bp overlap
NR4A1 2 datasets
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap
NR4A2 2 datasets
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap
NRF1 2 datasets
ChIP K-562 ENCSR998AJK.NRF1.K-562 343 bp overlap
ChIP K562 ENCFF689EWI 443 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 391 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 483 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 135 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 287 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 263 bp overlap
REST 3 datasets
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 148 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 459 bp overlap
RXRB 2 datasets
Motif DE_36h DE_36h-RXRB_MA1555.1 14 bp overlap
Motif DE_60h DE_60h-RXRB_MA1555.1 14 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 447 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 300 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 311 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 524 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 384 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 226 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 442 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 211 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 195 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 249 bp overlap
ZIM3 1 dataset
Motif DE_36h DE_36h-ZIM3_MA1709.2 11 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 187 bp overlap
ZNF331 2 datasets
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF549 2 datasets
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap