chr1 : 180,927,990 – 180,928,397
407 bp 75 TFs 1 linked gene
This 407 bp open chromatin element is linked to KIAA1614 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
KIAA1614 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:180,922,990 – 180,933,397
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 407 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 233 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 367 bp overlap
BRD4 9 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 57 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 350 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 175 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 262 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 262 bp overlap
ChIP SEM GSE83671.BRD4.SEM 273 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 329 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 193 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 181 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 134 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 209 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 319 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 151 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 203 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 156 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 337 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 199 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 364 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 317 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 145 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 247 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 238 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 175 bp overlap
ESR1 4 datasets
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 172 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 123 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 407 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 332 bp overlap
FIP1L1 1 dataset
ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 86 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 251 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 233 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 306 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 407 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 56 bp overlap
HIF1A 1 dataset
ChIP 501-mel GSE95280.HIF1A.501-mel 344 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 228 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 190 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 302 bp overlap
KMT2A 1 dataset
ChIP SEM GSE83671.KMT2A.SEM 129 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 407 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 407 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 407 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 222 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 114 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 407 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 145 bp overlap
MYC 3 datasets
ChIP NB69 GSE138295.MYC.NB69 102 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 337 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 407 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 406 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 407 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 162 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 143 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 406 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 211 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 94 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 295 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 93 bp overlap
NEUROD1 6 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 407 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 407 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 407 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 407 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 407 bp overlap
ChIP NCI-H524 GSE69394.NEUROD1.NCI-H524 83 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 407 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 407 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 407 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 327 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 281 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 336 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 154 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 174 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 204 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 280 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 126 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 123 bp overlap
OLIG2 4 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 53 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 281 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 277 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 403 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 218 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 340 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 121 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 127 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 147 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 183 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 184 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 371 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 55 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 66 bp overlap
REST 13 datasets
ChIP GM12878 ENCSR000BQS.REST.GM12878 58 bp overlap
ChIP H1 ENCFF429RUE 66 bp overlap
ChIP HEK293 ENCFF073DOT 100 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 131 bp overlap
ChIP HL-60 ENCFF589LOF 127 bp overlap
ChIP HeLa-S3 ENCFF911DTC 54 bp overlap
ChIP HepG2 ENCFF122AWR 61 bp overlap
ChIP Ishikawa ENCFF456OHV 136 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 50 bp overlap
ChIP MCF-7 ENCFF893RRD 108 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 68 bp overlap
ChIP PFSK-1 ENCFF845VHA 90 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 60 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 319 bp overlap
RUNX1 2 datasets
ChIP 697 GSE138031.RUNX1.697 80 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 333 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 198 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 242 bp overlap
SMARCA4 4 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 329 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 371 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 317 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 175 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 370 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 218 bp overlap
SOX4 2 datasets
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 407 bp overlap
ChIP glioblastoma GSE138328.SOX4.glioblastoma 225 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 270 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 152 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 81 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 358 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 322 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 250 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 169 bp overlap
TCF3 2 datasets
ChIP 697_HF GSE138031.TCF3.697_HF 256 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 407 bp overlap
TCF3-PBX1 1 dataset
ChIP 697_HF GSE138031.TCF3-PBX1.697_HF 143 bp overlap
TCF4 1 dataset
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 120 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 285 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 209 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 65 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 407 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 407 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 140 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 407 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 100 bp overlap
ZNF449 1 dataset
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 134 bp overlap
Huangfu Lab · Publications · Resources · Contact