chr9 : 91,721,275 91,721,895
620 bp 91 TFs 2 linked genes
This 620 bp open chromatin element is linked to ROR2 and NFIL3 and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ROR2 228.8 kb Distal Multiome
NFIL3 297.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:91,716,275 – 91,726,895
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 192 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 349 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 57 bp overlap
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 122 bp overlap
CDX1 1 dataset
Motif DE_72h DE_72h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_72h DE_72h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_72h DE_72h-CDX4_MA1473.2 9 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 106 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 311 bp overlap
ChIP K562 ENCFF403WPG 179 bp overlap
CTCF 1 dataset
ChIP OCI-LY7 ENCFF086AXQ 74 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 70 bp overlap
EBF1 1 dataset
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
ESR1 18 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 192 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 171 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 248 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 122 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 112 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 190 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 245 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 232 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 134 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 173 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 191 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 182 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 208 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 186 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 129 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 176 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 83 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 172 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 97 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 149 bp overlap
ESRRA 2 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 240 bp overlap
ChIP K562 ENCFF968PEP 168 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 172 bp overlap
Ebf4 1 dataset
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
Erg 1 dataset
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FOS 3 datasets
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 88 bp overlap
ChIP myometrium_PT1063 GSE128230.FOS.myometrium_PT1063 70 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 125 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 300 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 133 bp overlap
ChIP DE DE-FOXA2-1 435 bp overlap
ChIP DE DE-FOXA2-2 523 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 218 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 325 bp overlap
FOXD2 1 dataset
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 224 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 283 bp overlap
GATA2 3 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP ESF GSE108408.GATA2.ESF 226 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 242 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 326 bp overlap
ChIP DE DE-GATA4-2 448 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 345 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 360 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 314 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 343 bp overlap
ChIP DE DE-GATA6-2 414 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 279 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 322 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 341 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 331 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 284 bp overlap
ChIP foregut GSE117136.GATA6.foregut 354 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 288 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 338 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 345 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HOXA10 1 dataset
Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
HOXC11 1 dataset
Motif DE_72h DE_72h-HOXC11_MA0651.3 11 bp overlap
HOXD10 1 dataset
Motif DE_72h DE_72h-HOXD10_MA1506.2 10 bp overlap
HOXD9 1 dataset
Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF616FJX 59 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 323 bp overlap
ChIP K562 ENCFF348IBL 227 bp overlap
ChIP K562 ENCFF771OHZ 351 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
JUN 1 dataset
ChIP myometrium_PT886 GSE128230.JUN.myometrium_PT886 74 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 159 bp overlap
KLF1 1 dataset
Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_72h DE_72h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
MED12 14 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 104 bp overlap
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 89 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 104 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 125 bp overlap
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 96 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 111 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 108 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 82 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 96 bp overlap
ChIP myometrium_PT848 GSE128230.MED12.myometrium_PT848 100 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 332 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 113 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 84 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 93 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 113 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 368 bp overlap
NFYB 3 datasets
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 168 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 209 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 130 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 158 bp overlap
PATZ1 1 dataset
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
PGR 4 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 332 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 301 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 155 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 218 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 387 bp overlap
PRDM9 2 datasets
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 127 bp overlap
SMAD2 1 dataset
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 360 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 198 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 152 bp overlap
SOX10 2 datasets
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 311 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 494 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SOX4 2 datasets
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 320 bp overlap
ChIP K562 ENCFF059YCJ 338 bp overlap
SP2 1 dataset
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPI1 8 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 132 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 219 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 82 bp overlap
ChIP HL-60 ENCFF645GBT 147 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 144 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 162 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 192 bp overlap
ChIP K562 ENCFF410ORC 108 bp overlap
SPIB 1 dataset
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 426 bp overlap
Sox11 2 datasets
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox6 2 datasets
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 284 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 166 bp overlap
ChIP K562 ENCFF620GMX 105 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 148 bp overlap
ChIP K562 ENCFF319QZT 296 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 70 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 106 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD4 2 datasets
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 171 bp overlap
THAP1 1 dataset
Motif DE_72h DE_72h-THAP1_MA0597.3 8 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 129 bp overlap
ZBTB18 1 dataset
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 258 bp overlap
ZNF263 1 dataset
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF410 1 dataset
Motif DE_72h DE_72h-ZNF410_MA0752.2 16 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap