ROR2
receptor tyrosine kinase like orphan receptor 2 | BDB, BDB1, NTRKR2

The protein encoded by this gene is a receptor protein tyrosine kinase and type I transmembrane protein that belongs to the ROR subfamily of cell surface receptors. The protein may be involved in the early formation of the chondrocytes and may be required for cartilage and growth plate development. Mutations in this gene can cause brachydactyly type B, a skeletal disorder characterized by hypoplasia/aplasia of distal phalanges and nails. In addition, mutations in this gene can cause the autosomal recessive form of Robinow syndrome, which is characterized by skeletal dysplasia with generalized limb bone shortening, segmental defects of the spine, brachydactyly, and a dysmorphic facial appearance. [provided by RefSeq, Jul 2008]

Member of: DE-4 DE-4.9 Developmental clusters: GC6
Biological processes 24 terms
Expression (TPM)
ROR2 — as a Regulated Gene

TFs regulating ROR2 0 TFs

Transcription factors with Perturb-seq knockdown data for ROR2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ROR2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to ROR2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ROR2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr9:91,714,355–91,714,808 235.6 kb Distal (>10kb) Multiome 186
chr9:91,721,275–91,721,895 228.8 kb Distal (>10kb) Multiome 91
chr9:91,886,525–91,887,118 63.5 kb Distal (>10kb) Multiome 127
chr9:91,899,016–91,900,833 49.9 kb Distal (>10kb) Multiome 545
chr9:91,907,557–91,908,633 42.1 kb Distal (>10kb) Multiome 400
chr9:91,939,791–91,941,167 10.0 kb Distal (>10kb) Multiome 168
chr9:91,945,246–91,945,588 4.6 kb Proximal (<10kb) 210
chr9:91,946,111–91,946,528 3.7 kb Proximal (<10kb) 59
chr9:91,948,140–91,949,358 1.4 kb Proximal (<10kb) Multiome 449
chr9:91,949,582–91,950,808 119 bp At TSS Multiome 453
chr9:91,952,242–91,952,784 2.0 kb Proximal (<10kb) 40
chr9:91,953,772–91,954,026 3.5 kb Proximal (<10kb) 21
chr9:91,954,829–91,955,056 4.6 kb Proximal (<10kb) 143
chr9:91,994,245–91,995,301 44.4 kb Distal (>10kb) Multiome 243
chr9:92,114,946–92,115,785 165.2 kb Distal (>10kb) Multiome 807
chr9:92,133,789–92,134,516 183.9 kb Distal (>10kb) Multiome 252
chr9:92,137,993–92,138,553 188.0 kb Distal (>10kb) Multiome 237
chr9:92,140,183–92,140,786 190.2 kb Distal (>10kb) Multiome 418

Genome Browser

Genomic view of the ROR2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr9:91,704,355 – 92,150,786
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq