chr8 : 28,693,945 – 28,694,142
197 bp 63 TFs 1 linked gene
This 197 bp open chromatin element is linked to EXTL3-AS1 and is bound by 63 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
EXTL3-AS1 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:28,688,945 – 28,699,142
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_DHTTHZ1 GSE125245.AR.LNCaP_DHTTHZ1 123 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 166 bp overlap
BRD4 1 dataset
ChIP SW480 GSE110473.BRD4.SW480 62 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 197 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 197 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 197 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 153 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 197 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 197 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 122 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 167 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 151 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 132 bp overlap
ChIP DE DE-FOXA2-1 197 bp overlap
ChIP DE DE-FOXA2-2 197 bp overlap
ChIP HepG2 ENCFF533COJ 197 bp overlap
ChIP HepG2 ENCFF533COJ 81 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 125 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA2 3 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 161 bp overlap
ChIP HepG2 ENCFF905PYM 197 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 120 bp overlap
GATA4 13 datasets
ChIP DE DE-GATA4-1 197 bp overlap
ChIP DE DE-GATA4-2 197 bp overlap
ChIP G296S GSE85628.GATA4.G296S 126 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 126 bp overlap
ChIP Hep-G2 ENCSR590CNM.GATA4.Hep-G2 163 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 138 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 161 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 139 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 182 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 177 bp overlap
ChIP foregut GSE117136.GATA4.foregut 197 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 197 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 197 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 197 bp overlap
ChIP AGS GSE51936.GATA6.AGS 131 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 138 bp overlap
ChIP DE DE-GATA6-1 197 bp overlap
ChIP DE DE-GATA6-2 197 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 197 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 197 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 197 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 197 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 197 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 197 bp overlap
ChIP foregut GSE117136.GATA6.foregut 197 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 197 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 197 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 197 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 197 bp overlap
GFI1 2 datasets
ChIP Hep-G2 ENCSR849FVL.GFI1.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF472INF 192 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 58 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 107 bp overlap
GLIS2 1 dataset
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 121 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 133 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF087XCR 197 bp overlap
HHEX 1 dataset
ChIP HepG2 ENCFF618PVM 197 bp overlap
HMG20B 1 dataset
ChIP HepG2 ENCFF756WYV 197 bp overlap
HNF4A 2 datasets
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 157 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 114 bp overlap
ISL2 1 dataset
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 139 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 165 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 197 bp overlap
KDM1A 6 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 158 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 105 bp overlap
ChIP K562 ENCFF128TYE 194 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 116 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 84 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 127 bp overlap
LEF1 1 dataset
ChIP K562 ENCFF889WGL 197 bp overlap
MAFF 3 datasets
ChIP HepG2 ENCFF452YUT 104 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 63 bp overlap
ChIP K562 ENCFF071YKK 109 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 159 bp overlap
ChIP K562 ENCFF455EEO 196 bp overlap
MAFK 3 datasets
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 57 bp overlap
ChIP HepG2 ENCFF743ZOF 72 bp overlap
ChIP HepG2 ENCFF767LDG 108 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 149 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 197 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 197 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR552YGL.NFE2.K-562 50 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 197 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 197 bp overlap
NR2F1 3 datasets
ChIP HepG2 ENCFF518ZRY 185 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 170 bp overlap
ChIP K562 ENCFF221HJH 197 bp overlap
NR2F2 2 datasets
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF483TVJ 119 bp overlap
NR2F6 5 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF429VKC 157 bp overlap
ChIP HepG2 ENCFF514UJI 190 bp overlap
ChIP K-562 ENCSR707QWA.NR2F6.K-562 193 bp overlap
ChIP K562 ENCFF674RQA 197 bp overlap
ONECUT1 3 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 184 bp overlap
ChIP HepG2 ENCFF243FIR 197 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 197 bp overlap
ONECUT2 2 datasets
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 178 bp overlap
ChIP Hep-G2 ENCSR661PKJ.ONECUT2.Hep-G2 139 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 197 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 57 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 81 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 63 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 197 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 197 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 197 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 197 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 152 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 129 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 197 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 197 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 63 bp overlap
SRF 1 dataset
ChIP K-562 ENCSR000BLK.SRF.K-562 125 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 149 bp overlap
TCF7 3 datasets
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF628OFQ 197 bp overlap
ChIP K-562 ENCSR863KUB.TCF7.K-562 177 bp overlap
TCF7L2 9 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 168 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 185 bp overlap
ChIP HEK293 ENCFF513JQN 197 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 197 bp overlap
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 189 bp overlap
ChIP Hep-G2 ENCSR000EVQ.TCF7L2.Hep-G2 91 bp overlap
ChIP HepG2 ENCFF125ABE 197 bp overlap
ChIP HepG2 ENCFF510OLG 197 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 178 bp overlap
YY1 5 datasets
ChIP H1 ENCFF524BTL 197 bp overlap
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 130 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 147 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 104 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 160 bp overlap
ZFP42 1 dataset
ChIP HEK293 GSE76494.ZFP42.HEK293 166 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 168 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 119 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 51 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 85 bp overlap
ZNF503 1 dataset
ChIP Hep-G2 ENCSR998YJI.ZNF503.Hep-G2 123 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 54 bp overlap
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