chr1 : 157,069,672 – 157,069,981
309 bp 60 TFs 1 linked gene
This 309 bp open chromatin element is linked to KRT8P45 and is bound by 60 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
KRT8P45 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:157,064,672 – 157,074,981
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 246 bp overlap
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 205 bp overlap
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 300 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 309 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 264 bp overlap
CHD1 1 dataset
ChIP A-549 ENCSR398YBM.CHD1.A-549 139 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 309 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 118 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 264 bp overlap
CTCF 2 datasets
ChIP RH4 GSE83726.CTCF.RH4 226 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 174 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 201 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 235 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 92 bp overlap
ESR1 2 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 246 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 142 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF018MKA 71 bp overlap
ChIP neural progenitor cell ENCFF018MKA 309 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 309 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 309 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 247 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 215 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 309 bp overlap
ChIP DE DE-FOXA2-2 280 bp overlap
FOXL2 1 dataset
ChIP HGrC1_EV-TGF GSE138496.FOXL2.HGrC1_EV-TGF 84 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 273 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 219 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 309 bp overlap
ChIP DE DE-GATA4-2 309 bp overlap
ChIP foregut GSE117136.GATA4.foregut 309 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 309 bp overlap
ChIP DE DE-GATA6-2 309 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 306 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 309 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 309 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 309 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 309 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 309 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 309 bp overlap
HDAC2 3 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 309 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 306 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 110 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 277 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 309 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 199 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 252 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 208 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 237 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 309 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 196 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 259 bp overlap
MYOD1 7 datasets
ChIP RD GSE137168.MYOD1.RD 278 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 309 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 309 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 301 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 306 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 252 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 258 bp overlap
MYOG 4 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 205 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 285 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 262 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 291 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 308 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 168 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 292 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 296 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 205 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 309 bp overlap
OTX2 2 datasets
ChIP WTC11 ENCFF634NAO 245 bp overlap
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 276 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 233 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 309 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 143 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 309 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 219 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 213 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 256 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 309 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 153 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 145 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 186 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 309 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 309 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 309 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 309 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 309 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 309 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 274 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 216 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 253 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 282 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 217 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 193 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 306 bp overlap
SNAI2 4 datasets
ChIP RD GSE137168.SNAI2.RD 228 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 179 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 221 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 140 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 299 bp overlap
SOX8 2 datasets
ChIP RH4 GSE116344.SOX8.RH4 309 bp overlap
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 276 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 289 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 243 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 189 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 270 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 309 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 309 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 155 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 252 bp overlap
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