chr7 : 52,211,693 – 52,212,338

645 bp 83 TFs 0 linked genes

This 645 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

83 transcription factors

ARNTL 1 dataset

ChIP U2OS GSE44236.ARNTL.U2OS 55 bp overlap

Bach1::Mafk 1 dataset

Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap

Bcl11B 1 dataset

Motif DE_60h DE_60h-Bcl11B_MA1989.2 9 bp overlap

CDX2 1 dataset

ChIP LS180_125 GSE31939.CDX2.LS180_125 142 bp overlap

CLOCK 1 dataset

ChIP U2OS GSE44236.CLOCK.U2OS 331 bp overlap

CTCF 3 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 338 bp overlap

ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 275 bp overlap

ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 245 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF460KDD 251 bp overlap

ChIP BLaER1 ENCFF680YXW 467 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 203 bp overlap

ESR1 1 dataset

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 370 bp overlap

ESRRA 1 dataset

Motif DE_60h DE_60h-ESRRA_MA0592.4 9 bp overlap

ESRRB 1 dataset

Motif DE_60h DE_60h-ESRRB_MA0141.4 10 bp overlap

Esrrg 1 dataset

Motif DE_60h DE_60h-Esrrg_MA0643.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 463 bp overlap

ChIP DE DE-FOXA2-2 474 bp overlap

FOXC1 1 dataset

Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap

FOXP2 1 dataset

Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap

GATA2 1 dataset

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 535 bp overlap

ChIP DE DE-GATA4-2 507 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 334 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 241 bp overlap

GATA6 15 datasets

ChIP AGS GSE51705.GATA6.AGS 139 bp overlap

ChIP DE DE-GATA6-1 451 bp overlap

ChIP DE DE-GATA6-2 499 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 462 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 428 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 438 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 439 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 477 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 472 bp overlap

ChIP HUG1N GSE51936.GATA6.HUG1N 201 bp overlap

ChIP PATU8988 GSE47535.GATA6.PATU8988 194 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 408 bp overlap

ChIP foregut GSE117136.GATA6.foregut 420 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 371 bp overlap

Gata3 1 dataset

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

HNF4A 3 datasets

Motif DE_60h DE_60h-HNF4A_MA1494.2 14 bp overlap

ChIP IM95 GSE114018.HNF4A.IM95 366 bp overlap

ChIP KATO-III GSE114018.HNF4A.KATO-III 288 bp overlap

HNRNPH1 2 datasets

ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 163 bp overlap

ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 163 bp overlap

Hmx1 1 dataset

Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap

Hmx2 1 dataset

Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap

Hnf1A 1 dataset

Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 299 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 264 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 355 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 384 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 288 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 385 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 379 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

MGA 1 dataset

Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap

MORC2 1 dataset

ChIP HeLa_V5-HUSH-KO GSE95451.MORC2.HeLa_V5-HUSH-KO 331 bp overlap

Mafg 1 dataset

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

NCOR1 1 dataset

ChIP LS180_125 GSE39277.NCOR1.LS180_125 148 bp overlap

NR1H2::RXRA 1 dataset

Motif DE_60h DE_60h-NR1H2RXRA_MA0115.1 17 bp overlap

NR2C1 1 dataset

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap

NR2F2 1 dataset

Motif DE_60h DE_60h-NR2F2_MA1111.2 7 bp overlap

NR4A1 1 dataset

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap

Nanog 1 dataset

Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap

Nr1H2 1 dataset

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

ONECUT1 1 dataset

Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap

Ppara 1 dataset

Motif DE_60h DE_60h-Ppara_MA2338.1 7 bp overlap

RFX7 1 dataset

Motif DE_48h DE_48h-RFX7_MA1554.2 8 bp overlap

RORA 1 dataset

Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 145 bp overlap

RXR 1 dataset

ChIP LS180_125 GSE31939.RXR.LS180_125 148 bp overlap

RXRA::VDR 1 dataset

Motif DE_60h DE_60h-RXRAVDR_MA0074.1 15 bp overlap

RXRG 1 dataset

Motif DE_60h DE_60h-RXRG_MA1556.1 14 bp overlap

Rarg 1 dataset

Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 489 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 405 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 364 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 361 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 374 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 510 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 278 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 255 bp overlap

SOX10 1 dataset

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 279 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 569 bp overlap

SOX4 1 dataset

Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap

Sox11 1 dataset

Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap

Sox17 1 dataset

Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap

Sox5 1 dataset

Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap

Sox7 1 dataset

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

TBX1 1 dataset

Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap

TBX19 1 dataset

Motif DE_48h DE_48h-TBX19_MA0804.2 17 bp overlap

TBX21 1 dataset

Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap

TBX4 1 dataset

Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap

TBXT 1 dataset

Motif DE_48h DE_48h-TBXT_MA0009.2 16 bp overlap

TCF7L1 1 dataset

Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap

TRPS1 1 dataset

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 152 bp overlap

ZNF384 1 dataset

Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap

ZNF449 1 dataset

Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap

ZNF652 1 dataset

Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap

ZNF677 1 dataset

Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap

ZNF770 1 dataset

Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap