chr7 : 20,650,859 – 20,651,080

221 bp 83 TFs 0 linked genes

This 221 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

83 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 165 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BCL11A 3 datasets

ChIP H1 ENCFF833IPY 145 bp overlap

ChIP WA01 ENCSR000BIP.BCL11A.WA01 201 bp overlap

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 132 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 163 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CEBPB 2 datasets

ChIP H1 ENCFF871PTR 189 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 197 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 221 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap

CTCF 2 datasets

ChIP HT-1080 GSE135580.CTCF.HT-1080 221 bp overlap

ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 88 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

EN2 1 dataset

Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 212 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 160 bp overlap

GATA6 2 datasets

ChIP DE_D1 S41-DE-d1-GATA6-exp2 166 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 166 bp overlap

GBX1 1 dataset

Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000BNR.HDAC2.WA01 170 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HNF1B 1 dataset

Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 221 bp overlap

LBX1 1 dataset

Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 10 datasets

ChIP GM23338 ENCFF065NZG 221 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 183 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 221 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 221 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 142 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 221 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 221 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 221 bp overlap

ChIP hESC GSE18292.NANOG.hESC 176 bp overlap

ChIP hESC GSE20650.NANOG.hESC 188 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

NR1H2::RXRA 1 dataset

Motif DE_12h DE_12h-NR1H2RXRA_MA0115.1 17 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

NR2F1 2 datasets

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Nr2f6 1 dataset

Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap

OSR1 1 dataset

Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap

OSR2 1 dataset

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

PAX3 1 dataset

Motif DE_12h DE_12h-PAX3_MA1546.2 14 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 11 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 221 bp overlap

ChIP GM23338 ENCFF333SNB 221 bp overlap

ChIP H1 ENCFF698ZAP 197 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 221 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 221 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 172 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 204 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 221 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 187 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 221 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 216 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 221 bp overlap

PRRX2 1 dataset

Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

Prdm14 1 dataset

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

Prdm15 1 dataset

Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 221 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 221 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

RELA 1 dataset

ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 86 bp overlap

RXRA 1 dataset

ChIP WA01 ENCSR000BJW.RXRA.WA01 131 bp overlap

RXRB 1 dataset

Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap

RXRG 1 dataset

Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap

Rxra 1 dataset

Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap

SMAD2 1 dataset

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 221 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 221 bp overlap

SMARCA4 3 datasets

ChIP WA09 GSE105028.SMARCA4.WA09 221 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 221 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 187 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 221 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 186 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 221 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 221 bp overlap

SOX2 4 datasets

ChIP HNSC GSE69479.SOX2.HNSC 194 bp overlap

ChIP hESC GSE69479.SOX2.hESC 192 bp overlap

ChIP hESC GSE18292.SOX2.hESC 171 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 221 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 159 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 221 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 207 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 142 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

TP53 1 dataset

ChIP H9 GSE142050.TP53.H9 221 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 159 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 221 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 195 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

ZNF35 1 dataset

Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 189 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 180 bp overlap