chr1 : 143,724,138 143,724,684
546 bp 60 TFs 2 linked genes
This 546 bp open chromatin element is linked to RNVU1-23 and RNVU1-18 and is bound by 60 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RNVU1-23 3.5 kb Proximal Proximity
RNVU1-18 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:143,719,138 – 143,729,684
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 359 bp overlap
ChIP K562 ENCFF938UXQ 440 bp overlap
BCL11A 2 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 59 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 76 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 316 bp overlap
BRD4 1 dataset
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 297 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 214 bp overlap
ChIP K562 ENCFF963TXY 248 bp overlap
CBFA2T3 3 datasets
ChIP K-562 GSE142227.CBFA2T3.K-562 348 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 332 bp overlap
ChIP K562 ENCFF673OEZ 349 bp overlap
CCNT2 2 datasets
ChIP K-562 ENCSR000DOA.CCNT2.K-562 178 bp overlap
ChIP K562 ENCFF199GSZ 425 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 207 bp overlap
CTCF 1 dataset
ChIP GM12872 ENCFF697BYI 267 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF739JDE 484 bp overlap
ChIP K562 ENCFF775HUO 319 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 98 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 314 bp overlap
ChIP K562 ENCFF226VMS 317 bp overlap
ESR1 9 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 127 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 235 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 392 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 254 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 378 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 239 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 342 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 326 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 286 bp overlap
FOXM1 1 dataset
ChIP K562 ENCFF255RHV 411 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 189 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 157 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 335 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 278 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 308 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 251 bp overlap
GATA2 5 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 278 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 271 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 135 bp overlap
ChIP K562 ENCFF088XQT 411 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 1 dataset
ChIP A-549 GSE85002.GATA4.A-549 236 bp overlap
GATA6 1 dataset
ChIP YCC-3 GSE51705.GATA6.YCC-3 147 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 132 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 474 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 239 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 217 bp overlap
ChIP K562 ENCFF744ALD 196 bp overlap
ChIP K562 ENCFF919OMP 506 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 362 bp overlap
ChIP K562 ENCFF055GAZ 183 bp overlap
ChIP K562 ENCFF317JJX 184 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 195 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 120 bp overlap
ChIP K562 ENCFF336RCR 461 bp overlap
KDM1A 3 datasets
ChIP K562 ENCFF133OLU 461 bp overlap
ChIP K562 ENCFF133OLU 299 bp overlap
ChIP K562 ENCFF934ZRG 501 bp overlap
KLF16 2 datasets
ChIP K-562 ENCSR760UVO.KLF16.K-562 233 bp overlap
ChIP K562 ENCFF464PIV 345 bp overlap
KLF6 2 datasets
ChIP K-562 ENCSR297CGF.KLF6.K-562 183 bp overlap
ChIP K562 ENCFF948QSP 291 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 385 bp overlap
MAFG 1 dataset
ChIP K562 ENCFF455EEO 199 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 291 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF880VZB 136 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 272 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 237 bp overlap
ChIP K562 ENCFF788MPU 289 bp overlap
ChIP K562 ENCFF866HRM 265 bp overlap
NR2F1 1 dataset
ChIP K562 ENCFF221HJH 450 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 238 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 256 bp overlap
ChIP K562 ENCFF674RQA 457 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 282 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 151 bp overlap
RCOR1 2 datasets
ChIP K-562 ENCSR000EGC.RCOR1.K-562 163 bp overlap
ChIP K562 ENCFF216EEJ 297 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 194 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 179 bp overlap
ChIP K562 ENCFF653BQJ 528 bp overlap
SMARCA4 1 dataset
ChIP K562 ENCFF506JCB 201 bp overlap
SOX6 1 dataset
ChIP K562 ENCFF059YCJ 117 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 223 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 109 bp overlap
TAL1 13 datasets
ChIP CD34 GSE52924.TAL1.CD34 177 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 258 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 189 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 366 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 292 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 300 bp overlap
ChIP K-562_MYO1D-Hub_KO GSE107726.TAL1.K-562_MYO1D-Hub_KO 189 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 209 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 301 bp overlap
ChIP K562 ENCFF620GMX 289 bp overlap
ChIP K562 ENCFF661CCK 103 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 248 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 242 bp overlap
ChIP K562 ENCFF909RDY 397 bp overlap
ChIP K562 ENCFF931DJY 271 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 326 bp overlap
ChIP K562 ENCFF319QZT 233 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 157 bp overlap
TRIM24 1 dataset
ChIP K562 ENCFF616RIL 451 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 182 bp overlap
ChIP K562 ENCFF053XDV 546 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 546 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 202 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 58 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 506 bp overlap