chr6 : 108,242,084 108,242,788
704 bp 72 TFs 0 linked genes
This 704 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:108,237,084 – 108,247,788
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 305 bp overlap
BRD4 1 dataset
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 175 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 155 bp overlap
CBX3 3 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 280 bp overlap
ChIP HCT116 ENCFF947BOL 431 bp overlap
ChIP K562 ENCFF410AQU 276 bp overlap
CBX5 4 datasets
ChIP GM12878 ENCFF542UDC 465 bp overlap
ChIP GM12878 ENCSR372GIN.CBX5.GM12878 177 bp overlap
ChIP K-562 ENCSR272JAT.CBX5.K-562 179 bp overlap
ChIP K562 ENCFF188CYP 317 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 176 bp overlap
CHAMP1 2 datasets
ChIP K-562 ENCSR065XVO.CHAMP1.K-562 465 bp overlap
ChIP K562 ENCFF860ZIW 457 bp overlap
CTCF 1 dataset
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 121 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 259 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 349 bp overlap
ChIP K562 ENCFF053BWO 385 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 304 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 662 bp overlap
ChIP DE DE-FOXA2-2 704 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 250 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 556 bp overlap
ChIP DE DE-GATA4-2 702 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 545 bp overlap
ChIP DE DE-GATA6-2 704 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 513 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 513 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 327 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 389 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 571 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 577 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR568PGX.HDAC1.K-562 225 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 352 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 456 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 445 bp overlap
KDM1A 1 dataset
ChIP K-562 ENCSR908CMW.KDM1A.K-562 279 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 146 bp overlap
MED1 1 dataset
ChIP adipocyte GSE140782.MED1.adipocyte 315 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 257 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 401 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 258 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 98 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 213 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 271 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 306 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 115 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 169 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 169 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 341 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 160 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 407 bp overlap
SETDB1 7 datasets
ChIP HEK293 ENCFF676PLV 473 bp overlap
ChIP HEK293 ENCFF676PLV 205 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 704 bp overlap
ChIP K-562 ENCSR000EWD.SETDB1.K-562 282 bp overlap
ChIP K562 ENCFF348FRY 703 bp overlap
ChIP K562 ENCFF348FRY 503 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 704 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 607 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 457 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 434 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 471 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 364 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 516 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 275 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 239 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 403 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 595 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 99 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 537 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 291 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 238 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 369 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 286 bp overlap
TRIM24 5 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 442 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 284 bp overlap
ChIP K562 ENCFF616RIL 231 bp overlap
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 470 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 386 bp overlap
TRIM28 16 datasets
ChIP HEK293 ENCFF265CEM 645 bp overlap
ChIP HEK293 ENCFF265CEM 460 bp overlap
ChIP HEK293 ENCFF582MWI 671 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 419 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 366 bp overlap
ChIP K-562 ENCSR000EVY.TRIM28.K-562 704 bp overlap
ChIP K-562 ENCSR474CVP.TRIM28.K-562 518 bp overlap
ChIP K-562 ENCSR000BRW.TRIM28.K-562 343 bp overlap
ChIP K562 ENCFF172UPN 220 bp overlap
ChIP K562 ENCFF429WPG 266 bp overlap
ChIP K562 ENCFF671NCI 704 bp overlap
ChIP K562 ENCFF671NCI 582 bp overlap
ChIP K562 ENCFF671NCI 377 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 419 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 168 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 367 bp overlap
USF1 2 datasets
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 127 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 128 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 209 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 139 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 433 bp overlap
ChIP K562 ENCFF875HLX 199 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 128 bp overlap
ZC3H8 1 dataset
ChIP K562 ENCFF495URH 431 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR322CFO.ZEB2.K-562 263 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 266 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 240 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 111 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 320 bp overlap
ZNF143 3 datasets
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 349 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 193 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 113 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 420 bp overlap
ZNF280A 3 datasets
ChIP HEK293 GSE76494.ZNF280A.HEK293 246 bp overlap
ChIP K-562 ENCSR370NFS.ZNF280A.K-562 304 bp overlap
ChIP K562 ENCFF706EWX 361 bp overlap
ZNF280D 2 datasets
ChIP HEK293 ENCFF420AXB 365 bp overlap
ChIP HEK293 ENCSR451CYX.ZNF280D.HEK293 283 bp overlap
ZNF317 6 datasets
ChIP HEK293 GSE76494.ZNF317.HEK293 325 bp overlap
ChIP HepG2 ENCFF018ISP 410 bp overlap
ChIP HepG2 ENCFF018ISP 376 bp overlap
ChIP K562 ENCFF896LCF 462 bp overlap
ChIP K562 ENCFF896LCF 473 bp overlap
ChIP WTC11 ENCFF537KXI 170 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 207 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 279 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 149 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 207 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 419 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 273 bp overlap