chr1 : 114,035,013 – 114,035,453
440 bp 56 TFs 1 linked gene
This 440 bp open chromatin element is linked to ENSG00000282048 and is bound by 56 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000282048 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:114,030,013 – 114,040,453
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 127 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 98 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 164 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 316 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 67 bp overlap
BRD3 1 dataset
ChIP H-1 GSE126661.BRD3.H-1 196 bp overlap
BRD4 1 dataset
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 440 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 152 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 440 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 193 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 256 bp overlap
ESR1 1 dataset
ChIP MCF-7_ethanol_MKL1D200 GSE107476.ESR1.MCF-7_ethanol_MKL1D200 59 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCSR597VGC.ETV6.GM12878 390 bp overlap
EZH2 3 datasets
ChIP H1 ENCFF232NZA 263 bp overlap
ChIP H1 ENCFF232NZA 440 bp overlap
ChIP H1 ENCFF232NZA 430 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 150 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 233 bp overlap
IRF2BP2 1 dataset
ChIP HEK293 GSE124636.IRF2BP2.HEK293 191 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 277 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 238 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 281 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 368 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 377 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 391 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 309 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 159 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 181 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 121 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 400 bp overlap
MPHOSPH8 1 dataset
ChIP H9 GSE95374.MPHOSPH8.H9 114 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 109 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 231 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 323 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 440 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 440 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 378 bp overlap
ChIP hESC GSE20650.NANOG.hESC 316 bp overlap
ChIP hESC GSE18292.NANOG.hESC 200 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 188 bp overlap
NIPBL 5 datasets
ChIP HEK293T_CRISPR-2 GSE122299.NIPBL.HEK293T_CRISPR-2 225 bp overlap
ChIP WA09 GSE105028.NIPBL.WA09 440 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 249 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 339 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 440 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 187 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 440 bp overlap
POU3F2 1 dataset
ChIP hiPSC_SGC0946 GSE149017.POU3F2.hiPSC_SGC0946 144 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 54 bp overlap
POU5F1 15 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
ChIP GM23338 ENCFF333SNB 82 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 440 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 416 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 198 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 158 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 434 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 218 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 218 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 440 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 440 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 268 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 165 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 200 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 378 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 202 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 212 bp overlap
RB1 1 dataset
ChIP MCF-7_siH1.2 GSE98728.RB1.MCF-7_siH1.2 122 bp overlap
RELA 1 dataset
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 273 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 324 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 117 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 327 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 440 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 356 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 260 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 195 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 132 bp overlap
SMARCA4 3 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 255 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 149 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 284 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 440 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 264 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 322 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 123 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 258 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 373 bp overlap
STAT2 1 dataset
ChIP THP-1 GSE128111.STAT2.THP-1 123 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 215 bp overlap
TBP 3 datasets
ChIP hESC GSE122298.TBP.hESC 186 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 169 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 271 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 202 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 118 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 440 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 440 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 266 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 339 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 440 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 149 bp overlap
ZNF143 1 dataset
ChIP WA09 GSE105028.ZNF143.WA09 235 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 170 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 223 bp overlap
ZNF507 2 datasets
ChIP MCF-7 ENCFF080XWY 331 bp overlap
ChIP MCF-7 ENCFF080XWY 205 bp overlap
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