chr6 : 93,835,441 – 93,836,093
652 bp 84 TFs 0 linked genes
This 652 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:93,830,441 – 93,841,093
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 322 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif ES_0h ES_0h-ARNTHIF1A_MA0259.2 5 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap
Atoh1 2 datasets
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CEBPD 2 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CREB1 4 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
E2F8 1 dataset
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 278 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 376 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 260 bp overlap
ChIP DE DE-GATA6-2 417 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 412 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 118 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 652 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 519 bp overlap
HAND2 2 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HIC2 4 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HIF1A 2 datasets
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
Motif ES_0h ES_0h-HIF1A_MA1106.2 6 bp overlap
Hmx2 2 datasets
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
Hmx3 2 datasets
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap
IRF3 1 dataset
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif ES_0h ES_0h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif ES_0h ES_0h-IRF9_MA0653.1 15 bp overlap
ISL2 2 datasets
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 264 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 280 bp overlap
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
Mafb 2 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 308 bp overlap
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 441 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 391 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 502 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 423 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 340 bp overlap
NEUROD1 2 datasets
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 2 datasets
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NKX2-5 2 datasets
Motif DE_12h DE_12h-NKX2-5_MA0063.3 7 bp overlap
Motif ES_0h ES_0h-NKX2-5_MA0063.3 7 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif ES_0h ES_0h-NR2F1_MA0017.3 12 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
NRL 2 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap
Nanog 2 datasets
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Motif ES_0h ES_0h-Nanog_MA2339.1 7 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap
Nkx3-2 2 datasets
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Motif ES_0h ES_0h-Nkx3-2_MA0122.4 10 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif ES_0h ES_0h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap
PAX4 2 datasets
Motif DE_12h DE_12h-PAX4_MA0068.2 8 bp overlap
Motif ES_0h ES_0h-PAX4_MA0068.2 8 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 379 bp overlap
ChIP GM23338 ENCFF450WCS 491 bp overlap
ChIP H1 ENCFF566JSR 79 bp overlap
ChIP H1 ENCFF566JSR 442 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU5F1 5 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 342 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 251 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 280 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
PROP1 2 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
Runx1 1 dataset
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 303 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 292 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 337 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 204 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
TBX19 2 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif ES_0h ES_0h-TBX19_MA0804.2 17 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
TEAD2 2 datasets
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 3 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
TWIST1 2 datasets
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Motif ES_0h ES_0h-TWIST1_MA1123.3 8 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 124 bp overlap
Yy1 2 datasets
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
Motif ES_0h ES_0h-Yy1_MA0095.4 8 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZNF354A 3 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF416 2 datasets
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF558 2 datasets
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
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