chr1 : 100,820,048 100,820,766
718 bp 81 TFs 0 linked genes
This 718 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:100,815,048 – 100,825,766
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 427 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 372 bp overlap
CTCF 74 datasets
ChIP 22Rv1 ENCFF466OXN 613 bp overlap
ChIP C4-2B ENCFF821XVN 713 bp overlap
ChIP C4-2B ENCFF821XVN 514 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DOHH2 ENCFF637WNW 517 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 205 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 152 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 165 bp overlap
ChIP GM12874 ENCFF942MTD 261 bp overlap
ChIP GM23338 ENCFF531QOI 351 bp overlap
ChIP GM23338 ENCFF772DML 106 bp overlap
ChIP GM23338 ENCFF832KWE 605 bp overlap
ChIP GM23338 ENCFF832KWE 459 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 129 bp overlap
ChIP H9 ENCFF152GTF 428 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 183 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 257 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 194 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 171 bp overlap
ChIP HCT116 ENCFF003KHP 421 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HCT116 ENCFF209YMI 270 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 214 bp overlap
ChIP HFFc6 ENCFF005CJI 556 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 251 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 220 bp overlap
ChIP IMR-90 GSE43070.CTCF.IMR-90 119 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 165 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 262 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 129 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 117 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 92 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP K562 ENCFF430KTH 321 bp overlap
ChIP K562 ENCFF598YSU 271 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 317 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP Loucy ENCFF359TVQ 199 bp overlap
ChIP Loucy ENCFF359TVQ 335 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 218 bp overlap
ChIP MCF 10A ENCFF988BGF 365 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 168 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 149 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 94 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 195 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 173 bp overlap
ChIP WTC11 ENCFF658QVH 123 bp overlap
ChIP WTC11 ENCFF658QVH 330 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 623 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 609 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 365 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 187 bp overlap
ChIP endodermal cell ENCFF471YCZ 411 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 160 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 183 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 409 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 164 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 148 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 156 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 174 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 166 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 173 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 219 bp overlap
ChIP neural progenitor cell ENCFF420RBO 289 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 180 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 437 bp overlap
CTCFL 2 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Motif ES_0h ES_0h-CTCFL_MA1102.3 8 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 265 bp overlap
ChIP BLaER1 ENCFF274GAT 217 bp overlap
FOXA1 5 datasets
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 54 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 142 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 445 bp overlap
ChIP DE DE-FOXA2-2 490 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
FOXA3 3 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
ChIP K562 ENCFF781VSC 341 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXD1 2 datasets
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
Motif ES_0h ES_0h-FOXD1_MA0031.2 7 bp overlap
FOXF2 2 datasets
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
Motif ES_0h ES_0h-FOXF2_MA0030.2 9 bp overlap
FOXG1 2 datasets
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
Motif ES_0h ES_0h-FOXG1_MA0613.1 8 bp overlap
FOXI1 2 datasets
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXK1 3 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif ES_0h ES_0h-FOXK1_MA0852.3 7 bp overlap
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXK2 2 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif ES_0h ES_0h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif ES_0h ES_0h-FOXL1_MA0033.2 7 bp overlap
FOXN3 2 datasets
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif ES_0h ES_0h-FOXN3_MA1489.1 8 bp overlap
FOXO4 2 datasets
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif ES_0h ES_0h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif ES_0h ES_0h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
FOXP2 2 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap
FOXP3 2 datasets
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif ES_0h ES_0h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxf1 2 datasets
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif ES_0h ES_0h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap
Foxj3 2 datasets
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Motif ES_0h ES_0h-Foxj3_MA0851.2 9 bp overlap
Foxo1 2 datasets
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif ES_0h ES_0h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif ES_0h ES_0h-Foxo3_MA0157.4 7 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 621 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 381 bp overlap
Msgn1 2 datasets
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 133 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 417 bp overlap
PHF8 1 dataset
ChIP H1 ENCFF427UFV 543 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 281 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 314 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 301 bp overlap
ChIP K562 ENCFF236IUS 369 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 133 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 74 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 365 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 307 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 230 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 160 bp overlap
Sox11 4 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 485 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 273 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 308 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 107 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 211 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 331 bp overlap
ChIP K562 ENCFF875HLX 465 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN1 2 datasets
Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 481 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 236 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ChIP K562 ENCFF594VNM 471 bp overlap
ZNF317 4 datasets
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ChIP WTC11 ENCFF537KXI 357 bp overlap
ChIP WTC11 ENCFF537KXI 342 bp overlap
ZNF343 2 datasets
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF417 2 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 188 bp overlap
ZNF547 2 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF574 2 datasets
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
Motif ES_0h ES_0h-ZNF574_MA1982.2 14 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp961 2 datasets
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap