chr1 : 94,887,715 94,887,999
284 bp 75 TFs 0 linked genes
This 284 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:94,882,715 – 94,892,999
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 284 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 272 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 231 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BRD4 2 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 265 bp overlap
ChIP hESC GSE33281.BRD4.hESC 73 bp overlap
CCAR2 2 datasets
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 147 bp overlap
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 147 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 182 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 168 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 172 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 164 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 233 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 284 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 200 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 228 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 183 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 158 bp overlap
INSM1 2 datasets
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Motif ES_0h ES_0h-INSM1_MA0155.1 12 bp overlap
JUN 4 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 284 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 216 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 284 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 209 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 284 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 135 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 166 bp overlap
ChIP WTC11 ENCFF223QFY 284 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 60 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 284 bp overlap
ChIP hESC GSE18292.NANOG.hESC 79 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 3 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
ChIP WTC11 ENCFF634NAO 212 bp overlap
PITX1 2 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 284 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 194 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 284 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 214 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 182 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 284 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 199 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 87 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 247 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 152 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 224 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 175 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 235 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 195 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 284 bp overlap
ZBTB7C 1 dataset
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF184 2 datasets
ChIP WTC11 ENCFF352POG 284 bp overlap
ChIP WTC11 ENCFF352POG 260 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 284 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap