chr5 : 45,741,155 45,741,623
468 bp 57 TFs 0 linked genes
This 468 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:45,736,155 – 45,746,623
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 128 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 67 bp overlap
ARNTL 2 datasets
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 245 bp overlap
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 229 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 167 bp overlap
CDK6 1 dataset
ChIP KB GSE52469.CDK6.KB 148 bp overlap
CDX2 1 dataset
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 82 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 247 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 313 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 264 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 256 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 178 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 227 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 292 bp overlap
ChIP DE DE-FOXA2-2 314 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 185 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 141 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 368 bp overlap
ChIP DE DE-GATA4-2 468 bp overlap
ChIP foregut GSE117136.GATA4.foregut 296 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 468 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 289 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 320 bp overlap
ChIP DE DE-GATA6-2 468 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 344 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 468 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 321 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 344 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 323 bp overlap
ChIP foregut GSE117136.GATA6.foregut 407 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 412 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 468 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 238 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 292 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF939VKA 237 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 385 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 316 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 388 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 420 bp overlap
MEIS1 2 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 276 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 206 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 253 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 198 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 239 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 228 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 141 bp overlap
NFIA 2 datasets
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIB 2 datasets
Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap
Motif DE_72h DE_72h-NFIB_MA1643.2 17 bp overlap
NFIC 2 datasets
Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap
Motif DE_72h DE_72h-NFIC_MA1527.2 15 bp overlap
NFIC::TLX1 2 datasets
Motif DE_60h DE_60h-NFICTLX1_MA0119.1 14 bp overlap
Motif DE_72h DE_72h-NFICTLX1_MA0119.1 14 bp overlap
NFIX 4 datasets
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
Motif DE_60h DE_60h-NFIX_MA1528.2 14 bp overlap
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
Motif DE_72h DE_72h-NFIX_MA1528.2 14 bp overlap
NFYB 2 datasets
Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap
Motif DE_72h DE_72h-NFYB_MA0502.3 9 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 149 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 304 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 320 bp overlap
PHF19 2 datasets
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 286 bp overlap
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 280 bp overlap
POU2F1 1 dataset
ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 257 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 307 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 327 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 398 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 216 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 171 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 357 bp overlap
SMARCA4 2 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 193 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 320 bp overlap
SOX10 2 datasets
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SP1 2 datasets
ChIP HEK293T ERP007114.SP1.HEK293T 265 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 240 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 313 bp overlap
TBX5 5 datasets
ChIP G296S GSE85628.TBX5.G296S 194 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 194 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 369 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 228 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 303 bp overlap
TEAD1 3 datasets
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 186 bp overlap
TEAD3 2 datasets
Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 170 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 227 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 145 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 140 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 247 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 198 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 205 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN31 2 datasets
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_72h DE_72h-ZSCAN31_MA1722.2 18 bp overlap
Zfp335 2 datasets
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap