chr4 : 179,163,851 179,165,273
1,422 bp 65 TFs 0 linked genes
This 1.4 kb open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:179,158,851 – 179,170,273
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 445 bp overlap
AR 23 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 327 bp overlap
ChIP 22Rv1_Crispr-36 GSE123618.AR.22Rv1_Crispr-36 240 bp overlap
ChIP 22Rv1_Crispr_WT3 GSE123618.AR.22Rv1_Crispr_WT3 262 bp overlap
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 359 bp overlap
ChIP 22Rv1_V5 GSE123618.AR.22Rv1_V5 315 bp overlap
ChIP 22Rv1_i176m GSE123618.AR.22Rv1_i176m 302 bp overlap
ChIP 22Rv1_r261g GSE123618.AR.22Rv1_r261g 385 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 157 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 212 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 184 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap
ChIP WTC11 ENCFF267GQJ 287 bp overlap
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ChIP prostate GSE56288.AR.prostate 178 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 395 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 363 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 158 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 309 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 392 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 285 bp overlap
ChIP prostate_DHT GSE61838.AR.prostate_DHT 197 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 314 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 283 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 283 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 233 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 500 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 150 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 304 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 401 bp overlap
EP300 1 dataset
ChIP 697 GSE138031.EP300.697 403 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ESR1 1 dataset
ChIP T-47D ENCSR000BKN.ESR1.T-47D 146 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 44 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 320 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 293 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 434 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 356 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 286 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 306 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 318 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 302 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 313 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 273 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 314 bp overlap
ChIP 22Rv1_TFS GSE123618.FOXA1.22Rv1_TFS 324 bp overlap
ChIP 22Rv1_TFS_Crispr GSE123618.FOXA1.22Rv1_TFS_Crispr 217 bp overlap
ChIP 22Rv1_TFS_Crispr-36 GSE123618.FOXA1.22Rv1_TFS_Crispr-36 301 bp overlap
ChIP 22Rv1_TFS_Crispr-70 GSE123618.FOXA1.22Rv1_TFS_Crispr-70 221 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 336 bp overlap
ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 344 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 338 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 365 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 287 bp overlap
ChIP HEK293_v5_TFS GSE123618.FOXA1.HEK293_v5_TFS 321 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 257 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 158 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 252 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 234 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap
ChIP T-47D GSE72249.FOXA1.T-47D 193 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 226 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 253 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 192 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 159 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 211 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 190 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 154 bp overlap
ChIP prostate_2030 GSE130408.FOXA1.prostate_2030 327 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 342 bp overlap
ChIP prostate_2078 GSE130408.FOXA1.prostate_2078 337 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 277 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 295 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 291 bp overlap
ChIP prostate_P19 GSE130408.FOXA1.prostate_P19 194 bp overlap
ChIP prostate_P1_T GSE130408.FOXA1.prostate_P1_T 287 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 268 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 238 bp overlap
FOXA2 2 datasets
ChIP PC-3_GSK GSE148982.FOXA2.PC-3_GSK 196 bp overlap
ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 194 bp overlap
GATA3 3 datasets
ChIP Kelly GSE94822.GATA3.Kelly 369 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 263 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 313 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 333 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 490 bp overlap
HDAC2 1 dataset
ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 213 bp overlap
HNF4G 2 datasets
ChIP 22Rv1 GSE85558.HNF4G.22Rv1 272 bp overlap
ChIP 22Rv1_Dox GSE85558.HNF4G.22Rv1_Dox 202 bp overlap
HOXB13 19 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 363 bp overlap
ChIP 22Rv1 GSE129951.HOXB13.22Rv1 347 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 110 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 331 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 305 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 263 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 343 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 319 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 261 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 145 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 304 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 159 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 349 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 363 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 312 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 371 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 296 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 233 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 277 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 334 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 662 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 144 bp overlap
MAFK 1 dataset
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MPHOSPH8 2 datasets
ChIP H9 GSE95374.MPHOSPH8.H9 457 bp overlap
ChIP H9 GSE95374.MPHOSPH8.H9 153 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 228 bp overlap
MYCN 1 dataset
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 131 bp overlap
NANOG 1 dataset
ChIP GM23338 ENCFF065NZG 311 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 216 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 825 bp overlap
NR3C1 2 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 250 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 263 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
PGR 4 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 290 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 269 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 202 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 259 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POLR2A 7 datasets
ChIP GM23338 ENCFF450WCS 210 bp overlap
ChIP GM23338 ENCFF450WCS 340 bp overlap
ChIP H1 ENCFF566JSR 367 bp overlap
ChIP H1 ENCFF833NJP 347 bp overlap
ChIP H1 ENCFF833NJP 411 bp overlap
ChIP H1 ENCFF833NJP 303 bp overlap
ChIP prostate gland ENCFF881OMH 211 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 280 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 284 bp overlap
POU5F1 1 dataset
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 194 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
Prdm5 1 dataset
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 177 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 386 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 151 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 367 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 214 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 327 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 232 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 232 bp overlap
TFAP2C 2 datasets
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 261 bp overlap
TLE3 3 datasets
ChIP 22Rv1 GSE123618.TLE3.22Rv1 287 bp overlap
ChIP 22Rv1_Crispr-36 GSE123618.TLE3.22Rv1_Crispr-36 315 bp overlap
ChIP 22Rv1_WT3_Crispr GSE123618.TLE3.22Rv1_WT3_Crispr 288 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 476 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP WA09 GSE105028.ZNF143.WA09 191 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 280 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 259 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF425 3 datasets
ChIP WTC11 ENCFF359IXT 295 bp overlap
ChIP WTC11 ENCFF359IXT 83 bp overlap
ChIP WTC11 ENCFF359IXT 117 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF770 1 dataset
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap