chr4 : 164,799,466 164,799,865
399 bp 70 TFs 0 linked genes
This 399 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:164,794,466 – 164,804,865
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 339 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 399 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 305 bp overlap
Atoh1 1 dataset
Motif ES_0h ES_0h-Atoh1_MA1467.3 7 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BIP.BCL11A.WA01 102 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 216 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 156 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 399 bp overlap
ChIP H1 ENCFF126NLU 339 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 121 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 321 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 261 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 374 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 69 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 350 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 176 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 292 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 187 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 190 bp overlap
GATA1 1 dataset
Motif ES_0h ES_0h-GATA1_MA0035.5 7 bp overlap
GRHL2 1 dataset
Motif ES_0h ES_0h-GRHL2_MA1105.3 8 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 399 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 399 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 388 bp overlap
JUND 1 dataset
ChIP H1 ENCFF468JZD 230 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 298 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 201 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
MAX 4 datasets
ChIP H1 ENCFF601FOM 303 bp overlap
ChIP H1 ENCFF914VQY 148 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 246 bp overlap
ChIP WTC11 ENCFF223QFY 399 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 184 bp overlap
MXI1 1 dataset
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
Msgn1 1 dataset
Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 305 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 204 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 399 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 399 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 177 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 399 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 399 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 399 bp overlap
ChIP hESC GSE20650.NANOG.hESC 267 bp overlap
ChIP hESC GSE18292.NANOG.hESC 83 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 12 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 167 bp overlap
ChIP GM23338 ENCFF333SNB 308 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 399 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 211 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 399 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 213 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 316 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 198 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 230 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 386 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 380 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 235 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 233 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 262 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 335 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 399 bp overlap
RARA 1 dataset
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SCRT1 1 dataset
Motif ES_0h ES_0h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 399 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 399 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 349 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 294 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 261 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 399 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 399 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 393 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 248 bp overlap
ChIP hESC GSE69479.SOX2.hESC 313 bp overlap
ChIP hESC GSE18292.SOX2.hESC 89 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 399 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 282 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 235 bp overlap
Sox11 1 dataset
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 80 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 159 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 233 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 399 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 344 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 233 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 180 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 216 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 218 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF24 5 datasets
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ChIP GM12878 ENCSR072PWP.ZNF24.GM12878 153 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 223 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 188 bp overlap
ChIP K562 ENCFF877JCX 247 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 288 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 399 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap