chr4 : 40,562,041 40,562,305
264 bp 54 TFs 0 linked genes
This 264 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:40,557,041 – 40,567,305
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 77 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 186 bp overlap
ATF3 3 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 140 bp overlap
ChIP K562 ENCFF604FPV 52 bp overlap
ChIP K562 ENCFF921JQW 213 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 112 bp overlap
ChIP K562 ENCFF674KTF 63 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 124 bp overlap
BRD2 2 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 175 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 171 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 90 bp overlap
BRD4 6 datasets
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 138 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 264 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 264 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 254 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 161 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 264 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 264 bp overlap
CEBPA 6 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 107 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 70 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 94 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 115 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 83 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 123 bp overlap
CEBPB 6 datasets
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 159 bp overlap
ChIP HL-60 GSE107553.CEBPB.HL-60 186 bp overlap
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 64 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 64 bp overlap
ChIP THP-1_NS1-Pam3csk-0h GSE103477.CEBPB.THP-1_NS1-Pam3csk-0h 61 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 120 bp overlap
CEBPG 2 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 264 bp overlap
ChIP K562 ENCFF783ADE 180 bp overlap
CTCF 2 datasets
ChIP CD14 ENCSR000ATN.CTCF.CD14 70 bp overlap
ChIP neutrophil ENCSR785YRL.CTCF.neutrophil 120 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF093OYK 132 bp overlap
ChIP BLaER1 ENCFF234NTO 121 bp overlap
ChIP BLaER1 ENCFF335XTP 106 bp overlap
ChIP BLaER1 ENCFF460KDD 179 bp overlap
ChIP BLaER1 ENCFF844FIP 56 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 77 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 246 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 79 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 264 bp overlap
ChIP DE DE-FOXA2-2 264 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 119 bp overlap
GABPA 1 dataset
ChIP HL-60 ENCFF515BEZ 94 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 264 bp overlap
ChIP DE DE-GATA4-2 264 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 264 bp overlap
ChIP DE DE-GATA6-2 264 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 264 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 264 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 264 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 264 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 264 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 264 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 264 bp overlap
IKZF1 1 dataset
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 93 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 166 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 264 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 151 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 206 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 144 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 241 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 164 bp overlap
ChIP MOLM-14 GSE65138.MED1.MOLM-14 176 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 98 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 83 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 259 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 190 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 91 bp overlap
PML 1 dataset
ChIP NB4 GSE126720.PML.NB4 56 bp overlap
POLR2A 1 dataset
ChIP HL-60 ENCFF321XKE 154 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 264 bp overlap
RAD21 1 dataset
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 264 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 232 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 166 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 81 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 264 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 264 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 261 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 264 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 238 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 264 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 144 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 264 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 264 bp overlap
STAT3 2 datasets
ChIP SU-DHL-2 GSE50723.STAT3.SU-DHL-2 56 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 90 bp overlap
TRIM24 3 datasets
ChIP K562 ENCFF616RIL 97 bp overlap
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 113 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 211 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 96 bp overlap
ChIP HCT116 ENCFF330PYP 138 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 177 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 125 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 264 bp overlap
ZNF24 1 dataset
ChIP GM12878 ENCFF688STO 51 bp overlap