chr4 : 15,294,800 15,295,244
444 bp 59 TFs 0 linked genes
This 444 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:15,289,800 – 15,300,244
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR949COJ.ARNTL.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 220 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 266 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 416 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 444 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 405 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 231 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 304 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 420 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 444 bp overlap
CREB5 1 dataset
ChIP SK-N-SH ENCFF144PMI 345 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 345 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 256 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 402 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF829RWA 334 bp overlap
ChIP SK-N-SH ENCFF829RWA 155 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 444 bp overlap
FLI1 5 datasets
ChIP A-673 GSE99959.FLI1.A-673 400 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 444 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 444 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 316 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 380 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 256 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 210 bp overlap
ChIP DE DE-FOXA2-1 417 bp overlap
ChIP DE DE-FOXA2-2 430 bp overlap
FOXJ3 2 datasets
ChIP SK-N-SH ENCFF124KVL 436 bp overlap
ChIP SK-N-SH ENCFF124KVL 235 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 406 bp overlap
ChIP SK-N-SH ENCFF764OZD 412 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 155 bp overlap
GATA3 9 datasets
ChIP BE2C GSE65664.GATA3.BE2C 444 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 372 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 444 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 337 bp overlap
ChIP NGP GSE65664.GATA3.NGP 255 bp overlap
ChIP SH-SY5Y ENCFF475HYF 392 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 438 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 366 bp overlap
ChIP SK-N-SH ENCFF040SSB 374 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 248 bp overlap
ChIP DE DE-GATA4-1 444 bp overlap
ChIP DE DE-GATA4-2 444 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 222 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 240 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 444 bp overlap
ChIP DE DE-GATA6-2 444 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 444 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 444 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 444 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 444 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 444 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 444 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 444 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH ENCFF370MHZ 285 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 338 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 282 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 421 bp overlap
ChIP SK-N-SH ENCFF285GEQ 217 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 321 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 275 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 290 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 444 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 399 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 422 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 444 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 364 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 268 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 428 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 444 bp overlap
MYCN 4 datasets
ChIP Kelly GSE94822.MYCN.Kelly 444 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 444 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 444 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 444 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 443 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 408 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 384 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 351 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 135 bp overlap
NFIB 4 datasets
ChIP MCF-7 ENCFF799WGQ 359 bp overlap
ChIP MCF-7 ENCFF925CGH 344 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 333 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 344 bp overlap
NFIC 4 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 317 bp overlap
ChIP K562 ENCFF167YID 241 bp overlap
ChIP SK-N-SH ENCFF965AKM 357 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 409 bp overlap
NFIX 2 datasets
ChIP K-562 ENCSR574VJG.NFIX.K-562 262 bp overlap
ChIP K562 ENCFF382SJS 290 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 270 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 444 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 413 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 134 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCFF747MAS 84 bp overlap
RARA 1 dataset
ChIP SK-N-SH GSE69119.RARA.SK-N-SH 333 bp overlap
RCOR1 4 datasets
ChIP SK-N-SH ENCFF518EXB 247 bp overlap
ChIP SK-N-SH ENCFF518EXB 203 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 444 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 196 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 221 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 323 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 296 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 357 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 413 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 444 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 358 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 444 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 444 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 301 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 371 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 291 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 364 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 226 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 391 bp overlap
TCF4 3 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 383 bp overlap
ChIP SK-N-SH ENCFF270OWF 443 bp overlap
ChIP SK-N-SH ENCFF270OWF 444 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 401 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 407 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 326 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 286 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 382 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 381 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 415 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 111 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 191 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 317 bp overlap