chr3 : 147,380,563 147,381,162
599 bp 72 TFs 0 linked genes
This 599 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:147,375,563 – 147,386,162
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 149 bp overlap
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 254 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 329 bp overlap
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 202 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 359 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 462 bp overlap
BRD4 1 dataset
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 226 bp overlap
CBX7 2 datasets
ChIP hESC GSE133412.CBX7.hESC 346 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 364 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 308 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 206 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 357 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 482 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 394 bp overlap
EZH2 20 datasets
ChIP H1 ENCFF232NZA 512 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 515 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 232 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 194 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 524 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 81 bp overlap
ChIP astrocyte ENCFF365JTP 454 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 581 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 243 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 414 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 208 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 66 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 358 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 168 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 599 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 464 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 599 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 174 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 329 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 331 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 342 bp overlap
FOXK1 2 datasets
ChIP WTC11 ENCFF875IGU 244 bp overlap
ChIP WTC11 ENCFF875IGU 391 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 302 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 212 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 260 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 174 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 217 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 335 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 233 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 317 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 272 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 319 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 272 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 144 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 121 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 168 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 174 bp overlap
ChIP WTC11 ENCFF223QFY 328 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 527 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 179 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 599 bp overlap
PCGF2 1 dataset
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 340 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 271 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 599 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 348 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 186 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 599 bp overlap
SMARCA4 3 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 358 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 186 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 50 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 549 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 222 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 229 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 399 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 229 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 242 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 308 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SUZ12 4 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 205 bp overlap
ChIP H1 ENCFF881NFR 416 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 232 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 215 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 249 bp overlap
ChIP WTC11 ENCFF502QUV 405 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 398 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap