chr3 : 138,408,912 – 138,409,103
191 bp 69 TFs 0 linked genes
This 191 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:138,403,912 – 138,414,103
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 122 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 121 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 74 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 166 bp overlap
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 191 bp overlap
Ascl2 1 dataset
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BACH1 1 dataset
ChIP H1 ENCFF282VDB 70 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 76 bp overlap
BHLHE22 1 dataset
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 1 dataset
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 191 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 153 bp overlap
CTCF 3 datasets
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 102 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 191 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 191 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 191 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 191 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 154 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 191 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 95 bp overlap
FOXA1 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 82 bp overlap
GLI3 1 dataset
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
Gli1 1 dataset
Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 149 bp overlap
JUN 1 dataset
ChIP DE_D2 S54-DE-d2-JUN-exp2 108 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 109 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 123 bp overlap
ChIP K562 ENCFF455EEO 133 bp overlap
MAFK 3 datasets
ChIP H1 ENCFF854XWE 73 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 87 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 136 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 120 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 165 bp overlap
MED1 2 datasets
ChIP SUM159PT_100nMtrametinib_24h GSE87418.MED1.SUM159PT_100nMtrametinib_24h 169 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 181 bp overlap
MSC 1 dataset
Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 191 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 62 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 119 bp overlap
MYF5 2 datasets
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
ChIP Rh18 GSE84628.MYF5.Rh18 137 bp overlap
MYOD1 8 datasets
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
ChIP RD GSE137168.MYOD1.RD 191 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 191 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 191 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 191 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 191 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 191 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 168 bp overlap
MYOG 2 datasets
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 191 bp overlap
NANOG 4 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 60 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 191 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 191 bp overlap
ChIP hESC GSE20650.NANOG.hESC 126 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 181 bp overlap
NFE2L1 2 datasets
ChIP WTC11 ENCFF644BPU 116 bp overlap
ChIP WTC11 ENCFF644BPU 191 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NR3C1 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 98 bp overlap
Neurod2 1 dataset
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PGR 4 datasets
ChIP AB32 GSE31129.PGR.AB32 128 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 143 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 129 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 93 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 191 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 109 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 100 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 59 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 191 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 52 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 191 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 191 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 88 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 82 bp overlap
ChIP MDM GSE103477.RAD21.MDM 98 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 140 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 146 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 181 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 116 bp overlap
Rhox11 1 dataset
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 123 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 191 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 191 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 191 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 76 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 191 bp overlap
TFAP4::FLI1 1 dataset
Motif ES_0h ES_0h-TFAP4FLI1_MA1967.2 14 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 128 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
ZBTB18 1 dataset
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 191 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 191 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 191 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 62 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 142 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 126 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 191 bp overlap
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