chr3 : 43,369,816 43,370,499
683 bp 64 TFs 0 linked genes
This 683 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:43,364,816 – 43,375,499
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 198 bp overlap
BRD2 3 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 245 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 367 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 273 bp overlap
BRD4 9 datasets
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 198 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 311 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 158 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 205 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 206 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 278 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 304 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 311 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 299 bp overlap
CBFA2T3 1 dataset
ChIP Kasumi-1 GSE126953.CBFA2T3.Kasumi-1 106 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 198 bp overlap
CEBPA 4 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 293 bp overlap
ChIP SKH1 GSE102697.CEBPA.SKH1 178 bp overlap
ChIP SKH1_10d GSE87283.CEBPA.SKH1_10d 174 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 184 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 245 bp overlap
CTCF 7 datasets
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 119 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 303 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 238 bp overlap
ChIP neutrophil ENCFF770HHA 431 bp overlap
ChIP neutrophil ENCSR785YRL.CTCF.neutrophil 568 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.CTCF.peripheral-blood-neutrophil_PMA-1 236 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 205 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 111 bp overlap
ChIP BLaER1 ENCFF896HSY 373 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 178 bp overlap
EGR1 2 datasets
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 323 bp overlap
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 232 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 165 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 269 bp overlap
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 242 bp overlap
ERG 4 datasets
ChIP ME-1 GSE46044.ERG.ME-1 294 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 223 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 281 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 325 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 269 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 275 bp overlap
EVI1 2 datasets
ChIP SKH1 GSE87283.EVI1.SKH1 416 bp overlap
ChIP SKH1_10d GSE87283.EVI1.SKH1_10d 289 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 217 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 272 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 337 bp overlap
GATA2 2 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 398 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 423 bp overlap
GFI1 1 dataset
ChIP THP-1 GSE90769.GFI1.THP-1 170 bp overlap
JMJD1C 3 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 252 bp overlap
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 181 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 197 bp overlap
KAT2A 1 dataset
ChIP AML_shaml1-eto GSE131939.KAT2A.AML_shaml1-eto 96 bp overlap
KDM1A 1 dataset
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 193 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 82 bp overlap
KMT2A 2 datasets
ChIP MV4-11 GSE79899.KMT2A.MV4-11 265 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 300 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 264 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 234 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 387 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 387 bp overlap
LMO2 3 datasets
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 233 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 190 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 266 bp overlap
MECOM 3 datasets
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 206 bp overlap
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 222 bp overlap
ChIP SKH1_E2 GSE102697.MECOM.SKH1_E2 340 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 216 bp overlap
MEIS1 2 datasets
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 339 bp overlap
ChIP SEM GSE38339.MEIS1.SEM 140 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 242 bp overlap
ChIP K562 ENCFF320GSD 381 bp overlap
MYB 2 datasets
ChIP THP-1 GSE90769.MYB.THP-1 261 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 177 bp overlap
NCOR2 2 datasets
ChIP AML GSE131939.NCOR2.AML 175 bp overlap
ChIP AML_shaml1-eto GSE131939.NCOR2.AML_shaml1-eto 159 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 150 bp overlap
POLR2A 2 datasets
ChIP HL-60 ENCFF321XKE 505 bp overlap
ChIP spleen ENCFF044PYR 205 bp overlap
RAD21 7 datasets
ChIP MDM GSE103477.RAD21.MDM 168 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 180 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 313 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 172 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 352 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 512 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.RAD21.peripheral-blood-neutrophil_US-1 483 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 184 bp overlap
RUNX1 22 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 153 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 352 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 153 bp overlap
ChIP CD34_ADULT GSE70660.RUNX1.CD34_ADULT 224 bp overlap
ChIP CD34_FETAL GSE70660.RUNX1.CD34_FETAL 303 bp overlap
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 437 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 508 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1.Kasumi-1 276 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 352 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 255 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 253 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 253 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 352 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 342 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 304 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 422 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 419 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 303 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 331 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 294 bp overlap
ChIP U-937 GSE65427.RUNX1.U-937 167 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 183 bp overlap
RUNX1T1 9 datasets
ChIP CD34 GSE80773.RUNX1T1.CD34 162 bp overlap
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 516 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 312 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 283 bp overlap
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 192 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 294 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 181 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 234 bp overlap
ChIP Kasumi-1_shControl-AE GSE115115.RUNX1T1.Kasumi-1_shControl-AE 225 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 345 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 315 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 631 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 210 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 474 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 277 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 291 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 136 bp overlap
SMC3 2 datasets
ChIP peripheral-blood-neutrophil GSE126755.SMC3.peripheral-blood-neutrophil 483 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 526 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 331 bp overlap
SPI1 27 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 286 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 321 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 225 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 305 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 297 bp overlap
ChIP HL-60 ENCFF645GBT 191 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 313 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 160 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 188 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 291 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 295 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 332 bp overlap
ChIP ME-1 GSE46044.SPI1.ME-1 355 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 288 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 165 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 284 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 290 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 234 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 268 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 190 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 295 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 206 bp overlap
ChIP primary-monocyte_LPS-4h_donorO GSE128834.SPI1.primary-monocyte_LPS-4h_donorO 213 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 152 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 250 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 278 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 172 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 152 bp overlap
STAT3 4 datasets
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 166 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 142 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 322 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 246 bp overlap
STAT5A 1 dataset
ChIP MV4-11 GSE64862.STAT5A.MV4-11 163 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 211 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 278 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 323 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 515 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 105 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 318 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 97 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap