chr2 : 224,987,791 224,988,462
671 bp 95 TFs 0 linked genes
This 671 bp open chromatin element has no linked target genes and is bound by 95 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:224,982,791 – 224,993,462
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 73 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 94 bp overlap
Atf3 1 dataset
Motif DE_36h DE_36h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_36h DE_36h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_36h DE_36h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_36h DE_36h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_36h DE_36h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_36h DE_36h-BNC2_MA1928.2 7 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 235 bp overlap
DRGX 1 dataset
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
E2F6 1 dataset
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
E2F7 1 dataset
Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap
EMX1 1 dataset
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 402 bp overlap
ESR1 3 datasets
Motif DE_36h DE_36h-ESR1_MA0112.4 15 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 155 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 161 bp overlap
ESR2 2 datasets
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
EVX1 1 dataset
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
FOS 3 datasets
Motif DE_36h DE_36h-FOS_MA0476.2 8 bp overlap
ChIP IMR-90 ENCFF179EDA 297 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 159 bp overlap
FOSL1 2 datasets
ChIP BT-549 GSE112961.FOSL1.BT-549 202 bp overlap
Motif DE_36h DE_36h-FOSL1_MA0477.3 9 bp overlap
FOSL2 3 datasets
Motif DE_36h DE_36h-FOSL2_MA0478.2 10 bp overlap
ChIP SK-N-SH ENCFF127ZDW 269 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 162 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 339 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 418 bp overlap
ChIP DE DE-GATA4-2 437 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 333 bp overlap
ChIP DE DE-GATA6-2 563 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 610 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 281 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 308 bp overlap
GSX1 1 dataset
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
HNF4A 1 dataset
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
HOXA1 1 dataset
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXB2 1 dataset
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
ISX 1 dataset
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
JDP2 1 dataset
Motif DE_36h DE_36h-JDP2_MA0655.1 9 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 241 bp overlap
Motif DE_36h DE_36h-JUNB_MA0490.3 9 bp overlap
JUND 2 datasets
Motif DE_36h DE_36h-JUND_MA0491.3 9 bp overlap
ChIP SK-N-SH ENCFF551NEQ 255 bp overlap
Jun 1 dataset
Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap
Lhx4 1 dataset
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MAF 1 dataset
Motif DE_36h DE_36h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_36h DE_36h-MAFA_MA1521.2 13 bp overlap
MAFK 1 dataset
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
MIXL1 1 dataset
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NKX6-2 1 dataset
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NR2F1 1 dataset
Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap
Nr2f6 1 dataset
Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap
PDX1 1 dataset
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
PPARD 1 dataset
Motif DE_36h DE_36h-PPARD_MA1550.2 14 bp overlap
PRRX1 1 dataset
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
RAX2 1 dataset
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RXRB 1 dataset
Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_36h DE_36h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap
SHOX 1 dataset
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 435 bp overlap
Shox2 1 dataset
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
THAP1 1 dataset
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
TLX2 1 dataset
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
ZNF214 1 dataset
Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap
ZNF331 1 dataset
ChIP HEK293 GSE76494.ZNF331.HEK293 242 bp overlap
ZNF410 1 dataset
Motif DE_36h DE_36h-ZNF410_MA0752.2 16 bp overlap
ZNF549 1 dataset
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF75A 1 dataset
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN16 1 dataset
Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap
mix-a 1 dataset
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap