chr2 : 224,222,397 224,222,550
153 bp 56 TFs 0 linked genes
This 153 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:224,217,397 – 224,227,550
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 68 bp overlap
BRD4 5 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 137 bp overlap
ChIP HeLa GSE151038.BRD4.HeLa 153 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 153 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 153 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 153 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 153 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 153 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 82 bp overlap
DDX21 3 datasets
ChIP A-375 GSE128080.DDX21.A-375 153 bp overlap
ChIP A-375_1726 GSE128080.DDX21.A-375_1726 153 bp overlap
ChIP A-375_1726plus GSE128080.DDX21.A-375_1726plus 153 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
Dux 1 dataset
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
ETS1 3 datasets
ChIP 786-O GSE86092.ETS1.786-O 153 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 150 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 153 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
HCFC1 5 datasets
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 94 bp overlap
ChIP HeLa-S3 ENCFF159VGJ 153 bp overlap
ChIP HeLa-S3 ENCSR000ECH.HCFC1.HeLa-S3 124 bp overlap
ChIP MCF-7 ENCFF595ZTV 153 bp overlap
ChIP MCF-7 ENCSR697CUP.HCFC1.MCF-7 153 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 153 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE56288.HOXB13.LNCaP 139 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 146 bp overlap
KLF10 1 dataset
ChIP MCF-7 GSE97661.KLF10.MCF-7 135 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
MAX 2 datasets
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 62 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 131 bp overlap
MED1 1 dataset
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 135 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 84 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 78 bp overlap
NANOG 2 datasets
ChIP WA09 GSE105028.NANOG.WA09 153 bp overlap
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 153 bp overlap
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 153 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
PROP1 1 dataset
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
Pgr 1 dataset
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 153 bp overlap
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.RELA.HeLa-B2_P65KD_TA_TNFA 71 bp overlap
SIX5 4 datasets
ChIP A-549 ENCSR000BRL.SIX5.A-549 153 bp overlap
ChIP GM12878 ENCSR000BJE.SIX5.GM12878 132 bp overlap
ChIP H1 ENCFF942SOJ 153 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 153 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 139 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 81 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 77 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 153 bp overlap
SRF 1 dataset
Motif ES_0h ES_0h-SRF_MA0083.3 16 bp overlap
STAT3 1 dataset
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 153 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 50 bp overlap
TBX19 1 dataset
Motif ES_0h ES_0h-TBX19_MA0804.2 17 bp overlap
TBXT 1 dataset
Motif ES_0h ES_0h-TBXT_MA0009.2 16 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 87 bp overlap
Thap11 1 dataset
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
USF1 13 datasets
ChIP A-549 ENCSR000BHX.USF1.A-549 153 bp overlap
ChIP A-549 ENCSR000BPV.USF1.A-549 153 bp overlap
ChIP A-549 ENCSR000BJB.USF1.A-549 151 bp overlap
ChIP H1 ENCFF090WVU 142 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 153 bp overlap
ChIP HCT116 ENCFF330PYP 153 bp overlap
ChIP Ishikawa ENCFF728IEG 153 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 152 bp overlap
ChIP SK-N-SH ENCFF967PDP 134 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 153 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 153 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 153 bp overlap
ChIP WTC11 ENCFF699QGS 153 bp overlap
USF2 8 datasets
ChIP A549 ENCFF343KII 153 bp overlap
ChIP GM12878 GSE97661.USF2.GM12878 153 bp overlap
ChIP H1 ENCFF434EDF 153 bp overlap
ChIP HeLa-S3 ENCFF765YUZ 153 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 136 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 127 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 107 bp overlap
ChIP WTC11 ENCFF139JAW 153 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 127 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF143 13 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 153 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 136 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 153 bp overlap
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 153 bp overlap
ChIP HEK293T GSE39263.ZNF143.HEK293T 153 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 153 bp overlap
ChIP HeLa-S3 ENCSR000ECO.ZNF143.HeLa-S3 153 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 153 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 153 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 153 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 153 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 153 bp overlap
ChIP WTC11 ENCFF249JUK 153 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 153 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 80 bp overlap
ZNF35 1 dataset
Motif ES_0h ES_0h-ZNF35_MA2333.1 7 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 90 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
ZNF770 1 dataset
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap