chr2 : 195,805,239 – 195,805,850
611 bp 95 TFs 0 linked genes
This 611 bp open chromatin element has no linked target genes and is bound by 95 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:195,800,239 – 195,810,850
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 317 bp overlap
ATF6 1 dataset
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
Bach1::Mafk 2 datasets
Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap
Motif ES_0h ES_0h-Bach1Mafk_MA0591.2 12 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CDX1 2 datasets
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CDX4 2 datasets
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
CREB3L4 1 dataset
Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap
DMRTC2 2 datasets
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_12h DE_12h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif ES_0h ES_0h-ELK1HOXA1_MA1931.1 14 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 147 bp overlap
ChIP hESC GSE17917.EP300.hESC 489 bp overlap
ETV5::DRGX 2 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::HOXA2 2 datasets
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Esrrg 1 dataset
Motif ES_0h ES_0h-Esrrg_MA0643.2 9 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
HMBOX1 2 datasets
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
Motif ES_0h ES_0h-HMBOX1_MA0895.2 7 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXB9 2 datasets
Motif DE_12h DE_12h-HOXB9_MA1503.2 9 bp overlap
Motif ES_0h ES_0h-HOXB9_MA1503.2 9 bp overlap
HOXC10 2 datasets
Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap
Motif ES_0h ES_0h-HOXC10_MA0905.2 9 bp overlap
HOXC12 2 datasets
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
Motif ES_0h ES_0h-HOXC12_MA0906.2 10 bp overlap
HOXC9 2 datasets
Motif DE_12h DE_12h-HOXC9_MA0485.3 9 bp overlap
Motif ES_0h ES_0h-HOXC9_MA0485.3 9 bp overlap
HOXD10 2 datasets
Motif DE_12h DE_12h-HOXD10_MA1506.2 10 bp overlap
Motif ES_0h ES_0h-HOXD10_MA1506.2 10 bp overlap
HOXD11 2 datasets
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
Motif ES_0h ES_0h-HOXD11_MA0908.2 9 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hoxa11 2 datasets
Motif DE_12h DE_12h-Hoxa11_MA0911.2 9 bp overlap
Motif ES_0h ES_0h-Hoxa11_MA0911.2 9 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF9 2 datasets
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
Motif ES_0h ES_0h-IRF9_MA0653.1 15 bp overlap
Isl1 2 datasets
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif ES_0h ES_0h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 276 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 245 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 586 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 498 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 611 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 570 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 424 bp overlap
ChIP hESC GSE18292.NANOG.hESC 254 bp overlap
ChIP hESC GSE20650.NANOG.hESC 220 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 183 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif ES_0h ES_0h-NR1D2_MA1532.2 15 bp overlap
NR2C1 1 dataset
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif ES_0h ES_0h-NR2F1_MA0017.3 12 bp overlap
NR2F2 1 dataset
Motif ES_0h ES_0h-NR2F2_MA1111.2 7 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap
Nr1H2 1 dataset
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif ES_0h ES_0h-Nr1h3Rxra_MA0494.2 16 bp overlap
OSR1 2 datasets
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
Motif ES_0h ES_0h-OSR1_MA1542.2 8 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap
POU5F1 11 datasets
ChIP BG03 GSE21614.POU5F1.BG03 275 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 599 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 557 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 179 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 365 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 306 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 126 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 467 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 175 bp overlap
POU5F1B 1 dataset
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Ppara 1 dataset
Motif ES_0h ES_0h-Ppara_MA2338.1 7 bp overlap
RARA 3 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
RARA::RXRA 2 datasets
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SMARCA4 3 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 606 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 389 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 239 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 407 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 459 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 182 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 497 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 166 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 263 bp overlap
SOX21 2 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Sox1 2 datasets
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Motif ES_0h ES_0h-Sox1_MA0870.1 15 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
VENTX 2 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif ES_0h ES_0h-VENTX_MA0724.1 9 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 274 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF582 2 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF708 4 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF75D 2 datasets
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap
ZNF8 1 dataset
Motif ES_0h ES_0h-ZNF8_MA1718.1 20 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
ZSCAN21 2 datasets
Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap
Motif ES_0h ES_0h-ZSCAN21_MA2336.1 7 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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