chr2 : 167,697,239 167,697,850
611 bp 65 TFs 0 linked genes
This 611 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:167,692,239 – 167,702,850
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 244 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPB 4 datasets
Motif DE_12h DE_12h-CEBPB_MA0466.4 10 bp overlap
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 205 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 63 bp overlap
CEBPE 1 dataset
Motif DE_12h DE_12h-CEBPE_MA0837.3 10 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA0838.1 10 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 135 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 239 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 136 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 240 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 222 bp overlap
ChIP DE DE-FOXA2-2 223 bp overlap
ChIP DE DE-FOXA2-2 292 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 310 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 246 bp overlap
ChIP DE DE-GATA6-2 409 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 505 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 382 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 538 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 205 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 408 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 525 bp overlap
Hnf1A 2 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 179 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 284 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 267 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 300 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 296 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 611 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 611 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 182 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 611 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 611 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 318 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 229 bp overlap
ChIP hESC GSE18292.NANOG.hESC 99 bp overlap
ChIP hESC GSE20650.NANOG.hESC 182 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 193 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 210 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 209 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 611 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 252 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 367 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 180 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMARCA4 3 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 252 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 174 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 346 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 216 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 520 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 215 bp overlap
SOX2 4 datasets
ChIP LK2 GSE137459.SOX2.LK2 335 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 353 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 353 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 320 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 106 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 151 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 428 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 374 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 325 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 236 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 344 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 280 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap