chr2 : 12,462,951 12,463,570
619 bp 67 TFs 0 linked genes
This 619 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:12,457,951 – 12,468,570
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 244 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 204 bp overlap
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 220 bp overlap
CC2D1A 3 datasets
ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 309 bp overlap
ChIP K562 ENCFF567XUT 362 bp overlap
ChIP K562 ENCFF567XUT 163 bp overlap
CDK8 1 dataset
ChIP monocyte_IFNg GSE120943.CDK8.monocyte_IFNg 135 bp overlap
CEBPB 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 157 bp overlap
CHAMP1 2 datasets
ChIP K-562 ENCSR065XVO.CHAMP1.K-562 252 bp overlap
ChIP K-562 ENCSR315NNL.CHAMP1.K-562 134 bp overlap
CTCF 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli GSE126755.CTCF.peripheral-blood-neutrophil_Ecoli 381 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 275 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 203 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 106 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 374 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 250 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 619 bp overlap
ChIP DE DE-FOXA2-2 619 bp overlap
FOXM1 3 datasets
ChIP K-562 ENCSR429QPP.FOXM1.K-562 190 bp overlap
ChIP K562 ENCFF255RHV 270 bp overlap
ChIP K562 ENCFF255RHV 70 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 619 bp overlap
ChIP DE DE-GATA4-2 619 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 256 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 619 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 363 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 619 bp overlap
ChIP DE DE-GATA6-2 619 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 583 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 619 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 127 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 619 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 619 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 266 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 414 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 115 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 161 bp overlap
MAF 1 dataset
ChIP monocyte GSE98367.MAF.monocyte 147 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 341 bp overlap
PLAG1 2 datasets
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
Motif DE_60h DE_60h-PLAG1_MA0163.1 14 bp overlap
PRDM9 4 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 2 datasets
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
RAD21 2 datasets
ChIP liver ENCFF289RIE 257 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 171 bp overlap
RELA 1 dataset
ChIP 786-M1A GSE98012.RELA.786-M1A 315 bp overlap
SCRT1 1 dataset
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap
SIX5 1 dataset
ChIP GM12878 ENCSR000BJE.SIX5.GM12878 150 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 619 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 538 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 568 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 347 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 331 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 192 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 217 bp overlap
SMC3 2 datasets
ChIP peripheral-blood-neutrophil GSE126755.SMC3.peripheral-blood-neutrophil 339 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 461 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 463 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 619 bp overlap
SP5 2 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SPI1 14 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 202 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 425 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 280 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 239 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 159 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 162 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 198 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 281 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 173 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 196 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 226 bp overlap
SPIC 2 datasets
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
STAT3 5 datasets
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 235 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 228 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 263 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 298 bp overlap
ChIP monocyte_resting GSE120943.STAT3.monocyte_resting 219 bp overlap
Spi1 2 datasets
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 360 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 183 bp overlap
TFAP2A 2 datasets
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 205 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 187 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 480 bp overlap
Wt1 2 datasets
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 344 bp overlap
ChIP K562 ENCFF875HLX 167 bp overlap
ZNF143 1 dataset
Motif DE_36h DE_36h-ZNF143_MA0088.2 16 bp overlap
ZNF175 1 dataset
ChIP HEK293 GSE76494.ZNF175.HEK293 100 bp overlap
ZNF189 2 datasets
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 231 bp overlap
ZNF319 2 datasets
ChIP K-562 ENCSR231PDA.ZNF319.K-562 358 bp overlap
ChIP K562 ENCFF561ZSB 361 bp overlap
ZNF341 2 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ZNF343 2 datasets
Motif DE_36h DE_36h-ZNF343_MA1711.2 16 bp overlap
Motif DE_60h DE_60h-ZNF343_MA1711.2 16 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 207 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 334 bp overlap
ZNF677 2 datasets
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
ZNF701 2 datasets
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZNF76 1 dataset
Motif DE_36h DE_36h-ZNF76_MA1716.2 17 bp overlap
ZNF768 1 dataset
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
Zfp335 2 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap