chr19 : 2,021,378 – 2,021,809
431 bp 50 TFs 1 linked gene
This 431 bp open chromatin element is linked to BTBD2 and is bound by 50 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
BTBD2 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:2,016,378 – 2,026,809
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 184 bp overlap
AR 3 datasets
ChIP LNCaP GSE80256.AR.LNCaP 211 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 99 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 53 bp overlap
ARID1A 1 dataset
ChIP Hep-G2 GSE69566.ARID1A.Hep-G2 121 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 202 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 92 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 231 bp overlap
BRD2 2 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 197 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 201 bp overlap
BRD3 4 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 284 bp overlap
ChIP MV4-11_IBET151_5000nM GSE120715.BRD3.MV4-11_IBET151_5000nM 222 bp overlap
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 229 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 239 bp overlap
BRD4 2 datasets
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 267 bp overlap
ChIP MV4-11_IBET151_5000nM GSE120715.BRD4.MV4-11_IBET151_5000nM 190 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 167 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 139 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 205 bp overlap
CTCF 10 datasets
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 96 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 172 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 91 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 185 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 218 bp overlap
ChIP Peyer's patch ENCFF701KWW 252 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 211 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 348 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 173 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 276 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 382 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 136 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 181 bp overlap
ESR1 6 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 314 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 60 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 105 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 241 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 71 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 147 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 257 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 142 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 119 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 195 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 237 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 157 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 217 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 291 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 176 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 236 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 211 bp overlap
ChIP K562 ENCFF094CMK 247 bp overlap
GATA2 7 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 243 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 239 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 431 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 386 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 263 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 148 bp overlap
GATA3 3 datasets
ChIP MCF-7 ENCFF352QVM 358 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 238 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 318 bp overlap
GATA3_Cter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Cter.T-47D_CR3flp 180 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 263 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 431 bp overlap
ChIP DE DE-GATA4-2 431 bp overlap
ChIP foregut GSE117136.GATA4.foregut 341 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 265 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 174 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 191 bp overlap
ChIP DE DE-GATA6-1 431 bp overlap
ChIP DE DE-GATA6-2 415 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 405 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 431 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 431 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 431 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 431 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 321 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 416 bp overlap
ChIP foregut GSE117136.GATA6.foregut 274 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 344 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 348 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 238 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 203 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 361 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
MAX 1 dataset
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 236 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 148 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 140 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 244 bp overlap
ChIP VCaP_Darolutamide GSE148358.MED1.VCaP_Darolutamide 122 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 152 bp overlap
NR3C1 3 datasets
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 89 bp overlap
ChIP breast_tumor_Male_15 GSE104399.NR3C1.breast_tumor_Male_15 167 bp overlap
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 218 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 171 bp overlap
POLR2A 2 datasets
ChIP Peyer's patch ENCFF767HVN 391 bp overlap
ChIP thyroid gland ENCFF979LRR 263 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 133 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 246 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 99 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 431 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 431 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 400 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 374 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 429 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 202 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 194 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 404 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 103 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 310 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 166 bp overlap
ZBTB7A 3 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 125 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 150 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
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