chr18 : 56,647,924 56,648,674
750 bp 57 TFs 2 linked genes
This 750 bp open chromatin element is linked to WDR7 and TXNL1 and is bound by 57 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
WDR7 2.7 kb Proximal Proximity
TXNL1 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:56,642,924 – 56,653,674
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 218 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BRD2 2 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 661 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 673 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 321 bp overlap
BRD4 4 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 702 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 310 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 285 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 392 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 273 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 216 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 603 bp overlap
EHF 1 dataset
Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
ChIP hESC GSE26097.EOMES.hESC 190 bp overlap
ETV6 1 dataset
ChIP GM12878 GSE97661.ETV6.GM12878 169 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 109 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 263 bp overlap
ChIP erythroblast ENCFF867JAR 503 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 440 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 247 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 356 bp overlap
ChIP DE DE-GATA4-2 422 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 612 bp overlap
ChIP DE DE-GATA6-2 509 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 487 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 460 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 540 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 441 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 627 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 619 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 514 bp overlap
ChIP foregut GSE117136.GATA6.foregut 269 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 452 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 552 bp overlap
ChIP K562 ENCFF055GAZ 337 bp overlap
ChIP K562 ENCFF317JJX 335 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 177 bp overlap
HOXB4 2 datasets
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF616FJX 571 bp overlap
ChIP GM12878 ENCFF753XDO 149 bp overlap
ChIP GM12878 ENCFF824TGK 412 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 61 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap
MYB 2 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 191 bp overlap
Mecom 2 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 393 bp overlap
ChIP K562 ENCFF998LHF 465 bp overlap
NUTM1 2 datasets
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 621 bp overlap
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 67 bp overlap
PHOX2B 2 datasets
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 2 datasets
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
POU3F2 2 datasets
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
POU4F2 2 datasets
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
Motif DE_48h DE_48h-POU4F2_MA0683.2 15 bp overlap
POU5F1B 2 datasets
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 353 bp overlap
RFX1 2 datasets
Motif DE_36h DE_36h-RFX1_MA0509.3 16 bp overlap
Motif DE_48h DE_48h-RFX1_MA0509.3 16 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 371 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 425 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 354 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 293 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 220 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 331 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 528 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 423 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 132 bp overlap
SREBP2 3 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 66 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 348 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 173 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
TAF1 1 dataset
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 127 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 129 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 264 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF382 2 datasets
Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap
Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF582 1 dataset
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap