chr17 : 9,329,669 – 9,330,506
837 bp 81 TFs 1 linked gene
This 837 bp open chromatin element is linked to STX8 and is bound by 81 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
STX8 245.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:9,324,669 – 9,335,506
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 179 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 498 bp overlap
BCOR 5 datasets
ChIP WA01 GSE104690.BCOR.WA01 332 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 227 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 374 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 613 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 546 bp overlap
BRD4 4 datasets
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 66 bp overlap
ChIP hESC GSE33281.BRD4.hESC 117 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 410 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 196 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 628 bp overlap
CREB1 2 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap
ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap
CTCF 22 datasets
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF531QOI 114 bp overlap
ChIP H9 ENCFF152GTF 402 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 165 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 114 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 232 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 184 bp overlap
ChIP brain ENCFF099ASU 460 bp overlap
ChIP brain ENCFF163BBN 389 bp overlap
ChIP brain ENCFF163BBN 180 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 142 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 142 bp overlap
ChIP endodermal cell ENCFF471YCZ 170 bp overlap
ChIP endodermal cell ENCFF471YCZ 214 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 252 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 244 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 132 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 240 bp overlap
ChIP neural progenitor cell ENCFF581WPG 471 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 268 bp overlap
ChIP neuron GSE115407.CTCF.neuron 196 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 326 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 274 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 280 bp overlap
Dmrt1 1 dataset
Motif DE_24h DE_24h-Dmrt1_MA1603.2 9 bp overlap
Dux 1 dataset
Motif DE_24h DE_24h-Dux_MA0611.3 11 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 52 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 130 bp overlap
ERF::FOXO1 1 dataset
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 173 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf2 2 datasets
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Motif DE_24h DE_24h-Ebf2_MA1604.2 9 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 581 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 530 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 730 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 635 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 741 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 280 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 230 bp overlap
Hoxa13 2 datasets
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 229 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 250 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 234 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 757 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 747 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 263 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 837 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 157 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 149 bp overlap
LIN54 2 datasets
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Motif DE_24h DE_24h-LIN54_MA0619.2 7 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 184 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 124 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 599 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 306 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 237 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 652 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 463 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 377 bp overlap
ChIP hESC GSE20650.NANOG.hESC 277 bp overlap
ChIP hESC GSE18292.NANOG.hESC 224 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 193 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 303 bp overlap
Nr2F6 2 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_24h DE_24h-Nr2F6_MA0728.1 15 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_24h DE_24h-Nr2e3_MA0164.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 157 bp overlap
PAX4 1 dataset
Motif DE_24h DE_24h-PAX4_MA0068.2 8 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_24h DE_24h-PHOX2B_MA0681.3 12 bp overlap
POU1F1 1 dataset
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
POU5F1 10 datasets
ChIP BG03 GSE21614.POU5F1.BG03 191 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 837 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 666 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 498 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 757 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 203 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 318 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 367 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 151 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 177 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 815 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 59 bp overlap
ChIP NCCIT GSE71675.PRDM14.NCCIT 519 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_24h DE_24h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 280 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Motif DE_24h DE_24h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 749 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 804 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 787 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 550 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 664 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 258 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 401 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 394 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 270 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 294 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 564 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 442 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 290 bp overlap
SOX10 1 dataset
Motif DE_24h DE_24h-SOX10_MA0442.3 6 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 319 bp overlap
ChIP hESC GSE18292.SOX2.hESC 146 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 299 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 150 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Sox11 1 dataset
Motif DE_24h DE_24h-Sox11_MA0869.3 8 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 362 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 488 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 227 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 330 bp overlap
TCF7L2 1 dataset
Motif DE_24h DE_24h-TCF7L2_MA0523.2 9 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 187 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 274 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 188 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 370 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 365 bp overlap
ZNF274 2 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif DE_24h DE_24h-ZNF274_MA1592.2 12 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 107 bp overlap
ZNF75D 2 datasets
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_24h DE_24h-ZNF75D_MA1601.2 12 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 162 bp overlap
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