chr16 : 48,052,422 – 48,053,261
839 bp 75 TFs 1 linked gene
This 839 bp open chromatin element is linked to ENSG00000288026 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000288026 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:48,047,422 – 48,058,261
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 486 bp overlap
Atoh1 1 dataset
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
BCL6B 1 dataset
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 130 bp overlap
BRD4 2 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 469 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 158 bp overlap
CDX1 1 dataset
Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 105 bp overlap
DPRX 2 datasets
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
EBF1 1 dataset
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 260 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 50 bp overlap
ChIP neural cell ENCFF442QNK 130 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_72h DE_72h-ETV5FOXO1_MA1947.2 10 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 457 bp overlap
Ebf4 1 dataset
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 388 bp overlap
ChIP DE DE-FOXA2-2 493 bp overlap
GATA2 2 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 178 bp overlap
ChIP DE DE-GATA4-1 698 bp overlap
ChIP DE DE-GATA4-2 662 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 495 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 384 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 277 bp overlap
ChIP AGS GSE51936.GATA6.AGS 96 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 191 bp overlap
ChIP DE DE-GATA6-1 700 bp overlap
ChIP DE DE-GATA6-2 695 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 627 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 822 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 619 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 661 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 811 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 758 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 634 bp overlap
ChIP foregut GSE117136.GATA6.foregut 433 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 328 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 261 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 362 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HNF4A 3 datasets
Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_72h DE_72h-HNF4A_MA0114.5 9 bp overlap
HNF4G 3 datasets
Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Motif DE_72h DE_72h-HNF4G_MA0484.3 9 bp overlap
HOXA10 1 dataset
Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap
HOXB9 1 dataset
Motif DE_60h DE_60h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_60h DE_60h-HOXC10_MA0905.2 9 bp overlap
HOXC11 1 dataset
Motif DE_60h DE_60h-HOXC11_MA0651.3 11 bp overlap
HOXC9 1 dataset
Motif DE_60h DE_60h-HOXC9_MA0485.3 9 bp overlap
HOXD10 1 dataset
Motif DE_60h DE_60h-HOXD10_MA1506.2 10 bp overlap
HOXD11 1 dataset
Motif DE_60h DE_60h-HOXD11_MA0908.2 9 bp overlap
HOXD9 1 dataset
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Hoxa11 1 dataset
Motif DE_60h DE_60h-Hoxa11_MA0911.2 9 bp overlap
IKZF1 1 dataset
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
JUN 1 dataset
ChIP DE_D1 S13-DE-d1-JUN-exp1 333 bp overlap
KLF1 2 datasets
Motif DE_48h DE_48h-KLF1_MA0493.3 8 bp overlap
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
KLF2 2 datasets
Motif DE_48h DE_48h-KLF2_MA1515.2 8 bp overlap
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF3 3 datasets
Motif DE_48h DE_48h-KLF3_MA1516.2 10 bp overlap
Motif DE_60h DE_60h-KLF3_MA1516.2 10 bp overlap
Motif DE_72h DE_72h-KLF3_MA1516.2 10 bp overlap
KLF4 3 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 165 bp overlap
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
KLF6 2 datasets
Motif DE_48h DE_48h-KLF6_MA1517.2 9 bp overlap
Motif DE_60h DE_60h-KLF6_MA1517.2 9 bp overlap
KLF9 2 datasets
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
Motif DE_60h DE_60h-KLF9_MA1107.3 11 bp overlap
MEIS1 2 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap
MEIS3 1 dataset
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
MYB 1 dataset
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Mecom 3 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NEUROG2 1 dataset
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
PBX2 1 dataset
Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 53 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 122 bp overlap
PRDM1 1 dataset
Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 143 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RFX7 1 dataset
Motif DE_72h DE_72h-RFX7_MA1554.2 8 bp overlap
Rfx6 1 dataset
Motif DE_72h DE_72h-Rfx6_MA1724.2 9 bp overlap
SMAD2 2 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 284 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 839 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 750 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 472 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 817 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 448 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 723 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 839 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 302 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 284 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 159 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 66 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 126 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 62 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 254 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 352 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 58 bp overlap
SP3 2 datasets
Motif DE_48h DE_48h-SP3_MA0746.3 11 bp overlap
Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 272 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TEAD1 2 datasets
ChIP adipocyte GSE140782.TEAD1.adipocyte 119 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 172 bp overlap
TEAD4 6 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 193 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 234 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 200 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 57 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 193 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 67 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 468 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 271 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 269 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 59 bp overlap
ZNF189 1 dataset
Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap
ZNF768 1 dataset
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
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