chr1 : 236,835,220 236,836,111
891 bp 52 TFs 0 linked genes
This 891 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:236,830,220 – 236,841,111
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 150 bp overlap
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 140 bp overlap
ATF3 4 datasets
ChIP liver ENCFF375GID 118 bp overlap
ChIP liver ENCFF867MFZ 431 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 358 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 230 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 109 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 530 bp overlap
CEBPB 2 datasets
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 106 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 201 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 201 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 146 bp overlap
EGR1 2 datasets
ChIP liver ENCFF130MBW 401 bp overlap
ChIP liver ENCSR736BUG.EGR1.liver 298 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 252 bp overlap
ChIP HepG2 ENCFF354ACD 325 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 140 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 211 bp overlap
ChIP breast-cancer_S176 GSE128018.ESR1.breast-cancer_S176 232 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 66 bp overlap
FOXA1 8 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 251 bp overlap
ChIP liver ENCFF537QZV 421 bp overlap
ChIP liver ENCFF749ERP 345 bp overlap
ChIP liver ERP002306.FOXA1.liver 534 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 402 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 291 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 492 bp overlap
FOXA2 9 datasets
ChIP DE DE-FOXA2-1 601 bp overlap
ChIP DE DE-FOXA2-2 552 bp overlap
ChIP HepG2 ENCFF533COJ 104 bp overlap
ChIP liver ENCFF877SFI 123 bp overlap
ChIP liver ENCFF888VJF 177 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 407 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 365 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 278 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 473 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 150 bp overlap
ChIP HepG2 ENCFF823ERM 341 bp overlap
GABPA 2 datasets
ChIP liver ENCFF500III 525 bp overlap
ChIP liver ENCSR038GMB.GABPA.liver 314 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 150 bp overlap
GATA3 2 datasets
ChIP Jurkat GSE120063.GATA3.Jurkat 181 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 189 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 580 bp overlap
ChIP DE DE-GATA4-2 578 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 732 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 664 bp overlap
GATA6 8 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 138 bp overlap
ChIP DE DE-GATA6-1 479 bp overlap
ChIP DE DE-GATA6-2 559 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 360 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 474 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 552 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 660 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 561 bp overlap
GLYR1 2 datasets
ChIP HeLa GSE20303.GLYR1.HeLa 326 bp overlap
ChIP HeLa GSE20303.GLYR1.HeLa 297 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 336 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 264 bp overlap
HNF4A 6 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 128 bp overlap
ChIP liver ENCFF354NRH 418 bp overlap
ChIP liver ENCFF354NRH 422 bp overlap
ChIP liver ENCFF449HPV 362 bp overlap
ChIP liver ERP002306.HNF4A.liver 353 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 371 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 208 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 409 bp overlap
JUND 4 datasets
ChIP liver ENCFF007WWT 180 bp overlap
ChIP liver ENCFF557PGE 477 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 412 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 200 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 322 bp overlap
MAX 4 datasets
ChIP liver ENCFF092GVW 481 bp overlap
ChIP liver ENCFF584QGB 457 bp overlap
ChIP liver ENCSR521IID.MAX.liver 312 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 265 bp overlap
NR2F2 3 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 133 bp overlap
ChIP liver ENCFF427MRU 421 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 192 bp overlap
ONECUT1 2 datasets
ChIP liver ERP002306.ONECUT1.liver 132 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 474 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 499 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 678 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 481 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 401 bp overlap
RARA 2 datasets
ChIP HepG2 ENCFF582XUA 357 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 558 bp overlap
REST 5 datasets
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 111 bp overlap
ChIP liver ENCFF240FWT 485 bp overlap
ChIP liver ENCFF577AZT 537 bp overlap
ChIP liver ENCSR867WPH.REST.liver 253 bp overlap
ChIP liver ENCSR893QWP.REST.liver 177 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 173 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 417 bp overlap
RXRA 3 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 183 bp overlap
ChIP liver ENCFF077DAP 401 bp overlap
ChIP liver ENCFF807CIA 515 bp overlap
SKI 2 datasets
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 432 bp overlap
ChIP HepG2 ENCFF631IPX 225 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 376 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 401 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 395 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 370 bp overlap
ChIP liver ENCFF769YSM 310 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 151 bp overlap
TEAD4 1 dataset
ChIP Hep-G2 ENCSR000BRP.TEAD4.Hep-G2 185 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 179 bp overlap
ZBTB33 2 datasets
ChIP liver ENCFF592BJA 521 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 328 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 146 bp overlap
ZFX 1 dataset
ChIP HEK293T ENCFF402JZW 412 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 179 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 217 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap